Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 PPT1-215ENST00000641471 2368 ntBASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 TMBIM7P-202ENST00000641474 1516 ntBASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 RN7SKP109-201ENST00000410592 316 ntBASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 KRT8P1-201ENST00000557533 1207 ntBASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 DUT-207ENST00000559416 635 ntTSL 2 BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 AC068867.1-201ENST00000559855 150 ntBASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 AC008972.2-201ENST00000606587 494 ntBASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
RP1L1Q8IWN7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
RP1L1Q8IWN7 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
RP1L1Q8IWN7 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
RP1L1Q8IWN7 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.02□□□□□ -0.32
RP1L1Q8IWN7 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.02□□□□□ -0.32
RP1L1Q8IWN7 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RP1L1Q8IWN7 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
RP1L1Q8IWN7 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.32
RP1L1Q8IWN7 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.02□□□□□ -0.32
RP1L1Q8IWN7 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.02□□□□□ -0.32
RP1L1Q8IWN7 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC13.02□□□□□ -0.32
RP1L1Q8IWN7 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.02□□□□□ -0.32
RP1L1Q8IWN7 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.02□□□□□ -0.32
RP1L1Q8IWN7 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC13.02□□□□□ -0.32
RP1L1Q8IWN7 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC13.02□□□□□ -0.32
RP1L1Q8IWN7 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC13.02□□□□□ -0.32
RP1L1Q8IWN7 AC004686.1-201ENST00000605113 538 ntBASIC13.02□□□□□ -0.32
RP1L1Q8IWN7 AC002044.2-201ENST00000624910 970 ntBASIC13.02□□□□□ -0.32
RP1L1Q8IWN7 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
RP1L1Q8IWN7 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RP1L1Q8IWN7 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
RP1L1Q8IWN7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC13.02□□□□□ -0.32
RP1L1Q8IWN7 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RP1L1Q8IWN7 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.02□□□□□ -0.32
RP1L1Q8IWN7 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 CHCHD2P2-201ENST00000503744 321 ntBASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 AC131206.1-201ENST00000538078 1211 ntBASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 AC138701.2-201ENST00000553634 226 ntBASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms