Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 AC041040.2-201ENST00000622926 2899 ntBASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 AC007274.2-201ENST00000421675 662 ntBASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 AL596276.2-201ENST00000447525 331 ntBASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 SCARNA21-201ENST00000517026 139 ntBASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 AC024681.1-201ENST00000521917 487 ntBASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 PGAM1P5-201ENST00000548011 764 ntBASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 AC124068.2-201ENST00000569473 1109 ntBASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 AC005324.6-201ENST00000587972 613 ntBASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 AC021016.3-201ENST00000608367 477 ntBASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 AP000346.4-201ENST00000614827 381 ntBASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 AC091544.8-201ENST00000619490 361 ntBASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 AC133540.1-201ENST00000620845 1019 ntBASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 AC011474.4-201ENST00000623523 2076 ntBASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 AC090643.2-201ENST00000623442 2029 ntBASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 257.5 ms