Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH8P55286 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH8P55286 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
CDH8P55286 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH8P55286 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH8P55286 OR2K2-202ENST00000374428 1038 ntBASIC15.24■□□□□ 0.03
CDH8P55286 AL662890.1-201ENST00000396818 632 ntBASIC15.24■□□□□ 0.03
CDH8P55286 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH8P55286 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC15.24■□□□□ 0.03
CDH8P55286 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH8P55286 AL133466.1-201ENST00000447582 150 ntBASIC15.24■□□□□ 0.03
CDH8P55286 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC15.24■□□□□ 0.03
CDH8P55286 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC15.24■□□□□ 0.03
CDH8P55286 AC116345.2-201ENST00000512837 523 ntBASIC15.24■□□□□ 0.03
CDH8P55286 AC245884.6-201ENST00000515672 1067 ntBASIC15.24■□□□□ 0.03
CDH8P55286 RTN3P1-201ENST00000536295 711 ntBASIC15.24■□□□□ 0.03
CDH8P55286 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH8P55286 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.24■□□□□ 0.03
CDH8P55286 AC026803.1-201ENST00000569130 274 ntBASIC15.24■□□□□ 0.03
CDH8P55286 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.24■□□□□ 0.03
CDH8P55286 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH8P55286 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH8P55286 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH8P55286 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH8P55286 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH8P55286 AC111170.3-201ENST00000624282 2464 ntBASIC15.24■□□□□ 0.03
CDH8P55286 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CDH8P55286 AC067931.2-201ENST00000623655 2003 ntBASIC15.24■□□□□ 0.03
CDH8P55286 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH8P55286 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH8P55286 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.24■□□□□ 0.03
CDH8P55286 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CDH8P55286 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.24■□□□□ 0.03
CDH8P55286 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH8P55286 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH8P55286 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH8P55286 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH8P55286 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH8P55286 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH8P55286 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH8P55286 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH8P55286 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH8P55286 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH8P55286 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH8P55286 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CDH8P55286 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH8P55286 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH8P55286 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH8P55286 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CDH8P55286 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH8P55286 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.23■□□□□ 0.03
CDH8P55286 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH8P55286 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CDH8P55286 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH8P55286 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH8P55286 IMP3P2-201ENST00000489760 475 ntBASIC15.23■□□□□ 0.03
CDH8P55286 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH8P55286 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH8P55286 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.23■□□□□ 0.03
CDH8P55286 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC15.23■□□□□ 0.03
CDH8P55286 FGFR3P5-201ENST00000564496 886 ntBASIC15.23■□□□□ 0.03
CDH8P55286 PHBP15-201ENST00000574228 665 ntBASIC15.23■□□□□ 0.03
CDH8P55286 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.23■□□□□ 0.03
CDH8P55286 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH8P55286 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH8P55286 LINC01783-202ENST00000614408 828 ntBASIC15.23■□□□□ 0.03
CDH8P55286 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC15.23■□□□□ 0.03
CDH8P55286 BX284668.2-205ENST00000619677 828 ntBASIC15.23■□□□□ 0.03
CDH8P55286 AC007718.1-201ENST00000621078 280 ntBASIC15.23■□□□□ 0.03
CDH8P55286 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH8P55286 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH8P55286 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CDH8P55286 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH8P55286 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH8P55286 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CDH8P55286 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH8P55286 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH8P55286 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH8P55286 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.23■□□□□ 0.03
CDH8P55286 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.23■□□□□ 0.03
CDH8P55286 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH8P55286 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH8P55286 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC15.23■□□□□ 0.03
CDH8P55286 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH8P55286 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH8P55286 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH8P55286 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH8P55286 AL365181.3-201ENST00000605886 3222 ntBASIC15.22■□□□□ 0.03
CDH8P55286 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH8P55286 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CDH8P55286 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH8P55286 AL928654.5-201ENST00000624831 2501 ntBASIC15.22■□□□□ 0.03
CDH8P55286 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
CDH8P55286 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH8P55286 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH8P55286 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH8P55286 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH8P55286 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH8P55286 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CDH8P55286 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms