Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
LCN1P31025 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LCN1P31025 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LCN1P31025 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LCN1P31025 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LCN1P31025 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
LCN1P31025 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LCN1P31025 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LCN1P31025 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.33□□□□□ -0.28
LCN1P31025 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LCN1P31025 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.33□□□□□ -0.28
LCN1P31025 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.33□□□□□ -0.28
LCN1P31025 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LCN1P31025 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.33□□□□□ -0.28
LCN1P31025 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LCN1P31025 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LCN1P31025 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.33□□□□□ -0.28
LCN1P31025 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LCN1P31025 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LCN1P31025 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.33□□□□□ -0.28
LCN1P31025 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.33□□□□□ -0.28
LCN1P31025 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.33□□□□□ -0.28
LCN1P31025 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
LCN1P31025 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.33□□□□□ -0.28
LCN1P31025 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.33□□□□□ -0.28
LCN1P31025 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.33□□□□□ -0.28
LCN1P31025 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.33□□□□□ -0.28
LCN1P31025 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.33□□□□□ -0.28
LCN1P31025 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
LCN1P31025 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.33□□□□□ -0.28
LCN1P31025 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.33□□□□□ -0.28
LCN1P31025 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.33□□□□□ -0.28
LCN1P31025 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.33□□□□□ -0.28
LCN1P31025 RN7SL163P-201ENST00000583100 276 ntBASIC13.33□□□□□ -0.28
LCN1P31025 AC005962.1-201ENST00000584100 773 ntBASIC13.33□□□□□ -0.28
LCN1P31025 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.33□□□□□ -0.28
LCN1P31025 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.33□□□□□ -0.28
LCN1P31025 AL096828.3-201ENST00000615354 462 ntBASIC13.33□□□□□ -0.28
LCN1P31025 MIR6752-201ENST00000618442 71 ntBASIC13.33□□□□□ -0.28
LCN1P31025 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.33□□□□□ -0.28
LCN1P31025 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
LCN1P31025 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LCN1P31025 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
LCN1P31025 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
LCN1P31025 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LCN1P31025 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LCN1P31025 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LCN1P31025 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LCN1P31025 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LCN1P31025 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LCN1P31025 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LCN1P31025 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.33□□□□□ -0.28
LCN1P31025 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LCN1P31025 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LCN1P31025 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LCN1P31025 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LCN1P31025 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.32□□□□□ -0.28
LCN1P31025 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LCN1P31025 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LCN1P31025 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LCN1P31025 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.32□□□□□ -0.28
LCN1P31025 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LCN1P31025 HSPA8P5-201ENST00000456928 2069 ntBASIC13.32□□□□□ -0.28
LCN1P31025 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.32□□□□□ -0.28
LCN1P31025 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.32□□□□□ -0.28
LCN1P31025 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LCN1P31025 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LCN1P31025 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LCN1P31025 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LCN1P31025 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LCN1P31025 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.32□□□□□ -0.28
LCN1P31025 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.32□□□□□ -0.28
LCN1P31025 RPS2P32-201ENST00000439199 892 ntBASIC13.32□□□□□ -0.28
LCN1P31025 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
LCN1P31025 KRT18P15-201ENST00000458108 1291 ntBASIC13.32□□□□□ -0.28
LCN1P31025 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
LCN1P31025 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.32□□□□□ -0.28
LCN1P31025 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.32□□□□□ -0.28
LCN1P31025 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LCN1P31025 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.32□□□□□ -0.28
LCN1P31025 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.32□□□□□ -0.28
LCN1P31025 AC007663.3-201ENST00000609632 465 ntBASIC13.32□□□□□ -0.28
LCN1P31025 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
LCN1P31025 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LCN1P31025 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
LCN1P31025 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LCN1P31025 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LCN1P31025 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LCN1P31025 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LCN1P31025 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.32□□□□□ -0.28
LCN1P31025 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
LCN1P31025 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.32□□□□□ -0.28
LCN1P31025 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.32□□□□□ -0.28
LCN1P31025 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LCN1P31025 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LCN1P31025 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LCN1P31025 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LCN1P31025 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LCN1P31025 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LCN1P31025 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms