Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.6□□□□□ -0.07
PTPN3P26045 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.6□□□□□ -0.07
PTPN3P26045 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN3P26045 AC091271.1-201ENST00000611877 1162 ntBASIC14.6□□□□□ -0.07
PTPN3P26045 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN3P26045 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN3P26045 AL033527.4-201ENST00000641026 673 ntBASIC14.6□□□□□ -0.07
PTPN3P26045 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.6□□□□□ -0.07
PTPN3P26045 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.6□□□□□ -0.07
PTPN3P26045 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
PTPN3P26045 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.6□□□□□ -0.07
PTPN3P26045 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN3P26045 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN3P26045 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN3P26045 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PTPN3P26045 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN3P26045 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN3P26045 LINC00115-201ENST00000473798 1317 ntBASIC14.6□□□□□ -0.07
PTPN3P26045 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.6□□□□□ -0.07
PTPN3P26045 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN3P26045 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN3P26045 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
PTPN3P26045 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN3P26045 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN3P26045 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN3P26045 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.59□□□□□ -0.07
PTPN3P26045 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
PTPN3P26045 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN3P26045 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN3P26045 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
PTPN3P26045 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN3P26045 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.59□□□□□ -0.07
PTPN3P26045 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN3P26045 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN3P26045 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
PTPN3P26045 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN3P26045 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN3P26045 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN3P26045 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN3P26045 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.59□□□□□ -0.07
PTPN3P26045 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN3P26045 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN3P26045 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.59□□□□□ -0.07
PTPN3P26045 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.59□□□□□ -0.07
PTPN3P26045 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.59□□□□□ -0.07
PTPN3P26045 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.59□□□□□ -0.07
PTPN3P26045 AC103592.1-201ENST00000394513 664 ntBASIC14.59□□□□□ -0.07
PTPN3P26045 HMGA1P1-201ENST00000415560 1062 ntBASIC14.59□□□□□ -0.07
PTPN3P26045 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.59□□□□□ -0.07
PTPN3P26045 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN3P26045 SERPINA13P-202ENST00000478994 924 ntBASIC14.59□□□□□ -0.07
PTPN3P26045 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.59□□□□□ -0.07
PTPN3P26045 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.59□□□□□ -0.07
PTPN3P26045 AC009779.1-201ENST00000551138 283 ntBASIC14.59□□□□□ -0.07
PTPN3P26045 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.59□□□□□ -0.07
PTPN3P26045 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.59□□□□□ -0.07
PTPN3P26045 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.59□□□□□ -0.07
PTPN3P26045 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
PTPN3P26045 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.59□□□□□ -0.07
PTPN3P26045 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.59□□□□□ -0.07
PTPN3P26045 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.59□□□□□ -0.07
PTPN3P26045 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN3P26045 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.59□□□□□ -0.07
PTPN3P26045 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN3P26045 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN3P26045 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
PTPN3P26045 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN3P26045 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN3P26045 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.59□□□□□ -0.07
PTPN3P26045 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.59□□□□□ -0.07
PTPN3P26045 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
PTPN3P26045 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.58□□□□□ -0.07
PTPN3P26045 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PTPN3P26045 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.58□□□□□ -0.07
PTPN3P26045 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
PTPN3P26045 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
PTPN3P26045 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PTPN3P26045 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
PTPN3P26045 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
PTPN3P26045 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.58□□□□□ -0.07
PTPN3P26045 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PTPN3P26045 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.58□□□□□ -0.08
PTPN3P26045 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PTPN3P26045 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PTPN3P26045 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PTPN3P26045 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.58□□□□□ -0.08
PTPN3P26045 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PTPN3P26045 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PTPN3P26045 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PTPN3P26045 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PTPN3P26045 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.08
PTPN3P26045 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PTPN3P26045 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.58□□□□□ -0.08
PTPN3P26045 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.58□□□□□ -0.08
PTPN3P26045 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PTPN3P26045 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.58□□□□□ -0.08
PTPN3P26045 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PTPN3P26045 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PTPN3P26045 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PTPN3P26045 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms