Protein–RNA interactions for Protein: P23229

ITGA6, Integrin alpha-6, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6P23229 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ITGA6P23229 BAK1P1-201ENST00000317045 636 ntBASIC17.46■□□□□ 0.39
ITGA6P23229 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ITGA6P23229 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ITGA6P23229 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
ITGA6P23229 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ITGA6P23229 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ITGA6P23229 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC17.46■□□□□ 0.39
ITGA6P23229 AL355334.1-201ENST00000417713 215 ntBASIC17.46■□□□□ 0.39
ITGA6P23229 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC17.46■□□□□ 0.39
ITGA6P23229 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ITGA6P23229 RPL13AP19-201ENST00000434320 584 ntBASIC17.46■□□□□ 0.39
ITGA6P23229 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ITGA6P23229 LINC00634-202ENST00000505157 222 ntBASIC17.46■□□□□ 0.39
ITGA6P23229 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC17.46■□□□□ 0.39
ITGA6P23229 SNORD3B-1-201ENST00000577988 758 ntBASIC17.46■□□□□ 0.39
ITGA6P23229 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC17.46■□□□□ 0.39
ITGA6P23229 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC17.46■□□□□ 0.39
ITGA6P23229 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC17.46■□□□□ 0.39
ITGA6P23229 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC17.46■□□□□ 0.39
ITGA6P23229 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC17.46■□□□□ 0.39
ITGA6P23229 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ITGA6P23229 AC002044.2-201ENST00000624910 970 ntBASIC17.46■□□□□ 0.39
ITGA6P23229 HELLS-212ENST00000630929 400 ntTSL 5 BASIC17.46■□□□□ 0.39
ITGA6P23229 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC17.46■□□□□ 0.39
ITGA6P23229 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ITGA6P23229 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC17.46■□□□□ 0.39
ITGA6P23229 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.46■□□□□ 0.39
ITGA6P23229 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ITGA6P23229 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ITGA6P23229 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
ITGA6P23229 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ITGA6P23229 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ITGA6P23229 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ITGA6P23229 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ITGA6P23229 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
ITGA6P23229 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ITGA6P23229 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ITGA6P23229 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ITGA6P23229 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.45■□□□□ 0.38
ITGA6P23229 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
ITGA6P23229 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ITGA6P23229 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ITGA6P23229 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ITGA6P23229 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ITGA6P23229 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ITGA6P23229 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC17.45■□□□□ 0.38
ITGA6P23229 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC17.45■□□□□ 0.38
ITGA6P23229 AC092573.1-201ENST00000433054 884 ntBASIC17.45■□□□□ 0.38
ITGA6P23229 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC17.45■□□□□ 0.38
ITGA6P23229 RN7SL818P-201ENST00000485099 259 ntBASIC17.45■□□□□ 0.38
ITGA6P23229 IGHV1-12-201ENST00000518307 205 ntBASIC17.45■□□□□ 0.38
ITGA6P23229 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ITGA6P23229 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC17.45■□□□□ 0.38
ITGA6P23229 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC17.45■□□□□ 0.38
ITGA6P23229 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC17.45■□□□□ 0.38
ITGA6P23229 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC17.45■□□□□ 0.38
ITGA6P23229 RN7SL725P-201ENST00000606439 259 ntBASIC17.45■□□□□ 0.38
ITGA6P23229 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC17.45■□□□□ 0.38
ITGA6P23229 HLA-C-210ENST00000640219 976 ntBASIC17.45■□□□□ 0.38
ITGA6P23229 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
ITGA6P23229 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.45■□□□□ 0.38
ITGA6P23229 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ITGA6P23229 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ITGA6P23229 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC17.45■□□□□ 0.38
ITGA6P23229 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ITGA6P23229 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC17.45■□□□□ 0.38
ITGA6P23229 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ITGA6P23229 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
ITGA6P23229 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ITGA6P23229 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC17.45■□□□□ 0.38
ITGA6P23229 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ITGA6P23229 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.45■□□□□ 0.38
ITGA6P23229 AL139158.3-201ENST00000641212 1562 ntBASIC17.45■□□□□ 0.38
ITGA6P23229 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ITGA6P23229 AC025183.3-201ENST00000623526 1482 ntBASIC17.44■□□□□ 0.38
ITGA6P23229 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
ITGA6P23229 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
ITGA6P23229 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.44■□□□□ 0.38
ITGA6P23229 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC17.44■□□□□ 0.38
ITGA6P23229 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ITGA6P23229 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ITGA6P23229 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ITGA6P23229 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ITGA6P23229 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC17.44■□□□□ 0.38
ITGA6P23229 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC17.44■□□□□ 0.38
ITGA6P23229 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
ITGA6P23229 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC17.44■□□□□ 0.38
ITGA6P23229 OR52M2P-201ENST00000414298 959 ntBASIC17.44■□□□□ 0.38
ITGA6P23229 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ITGA6P23229 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ITGA6P23229 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ITGA6P23229 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC17.44■□□□□ 0.38
ITGA6P23229 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ITGA6P23229 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
ITGA6P23229 AC005912.2-201ENST00000619492 2400 ntBASIC17.44■□□□□ 0.38
ITGA6P23229 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC17.44■□□□□ 0.38
ITGA6P23229 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
ITGA6P23229 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
ITGA6P23229 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms