Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC24.06■■□□□ 1.44
TOP2AP11388 IGHVII-74-1-201ENST00000517572 241 ntBASIC24.06■■□□□ 1.44
TOP2AP11388 SAA2-206ENST00000530400 323 ntTSL 3 BASIC24.06■■□□□ 1.44
TOP2AP11388 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC24.06■■□□□ 1.44
TOP2AP11388 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TOP2AP11388 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC24.06■■□□□ 1.44
TOP2AP11388 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC24.06■■□□□ 1.44
TOP2AP11388 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
TOP2AP11388 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
TOP2AP11388 AC016397.2-201ENST00000624848 1985 ntBASIC24.06■■□□□ 1.44
TOP2AP11388 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TOP2AP11388 ERG-211ENST00000453032 1595 ntTSL 2 BASIC24.06■■□□□ 1.44
TOP2AP11388 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
TOP2AP11388 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TOP2AP11388 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC24.06■■□□□ 1.44
TOP2AP11388 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC24.06■■□□□ 1.44
TOP2AP11388 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TOP2AP11388 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
TOP2AP11388 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC24.06■■□□□ 1.44
TOP2AP11388 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
TOP2AP11388 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC24.06■■□□□ 1.44
TOP2AP11388 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TOP2AP11388 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
TOP2AP11388 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
TOP2AP11388 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC24.05■■□□□ 1.44
TOP2AP11388 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC24.05■■□□□ 1.44
TOP2AP11388 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC24.05■■□□□ 1.44
TOP2AP11388 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC24.05■■□□□ 1.44
TOP2AP11388 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC24.05■■□□□ 1.44
TOP2AP11388 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TOP2AP11388 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC24.05■■□□□ 1.44
TOP2AP11388 AC144831.1-201ENST00000573312 2656 ntBASIC24.05■■□□□ 1.44
TOP2AP11388 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC24.05■■□□□ 1.44
TOP2AP11388 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC24.05■■□□□ 1.44
TOP2AP11388 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
TOP2AP11388 FUK-207ENST00000571514 3054 ntTSL 2 BASIC24.05■■□□□ 1.44
TOP2AP11388 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
TOP2AP11388 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
TOP2AP11388 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TOP2AP11388 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC24.05■■□□□ 1.44
TOP2AP11388 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TOP2AP11388 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC24.05■■□□□ 1.44
TOP2AP11388 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
TOP2AP11388 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TOP2AP11388 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
TOP2AP11388 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC24.05■■□□□ 1.44
TOP2AP11388 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TOP2AP11388 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC24.05■■□□□ 1.44
TOP2AP11388 SNORA50C-201ENST00000408535 133 ntBASIC24.05■■□□□ 1.44
TOP2AP11388 YY1P2-201ENST00000438766 948 ntBASIC24.05■■□□□ 1.44
TOP2AP11388 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC24.05■■□□□ 1.44
TOP2AP11388 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC24.05■■□□□ 1.44
TOP2AP11388 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC24.05■■□□□ 1.44
TOP2AP11388 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC24.05■■□□□ 1.44
TOP2AP11388 SNX20-205ENST00000610485 557 ntTSL 5 BASIC24.05■■□□□ 1.44
TOP2AP11388 AC006986.1-201ENST00000612764 241 ntBASIC24.05■■□□□ 1.44
TOP2AP11388 AC008622.3-201ENST00000621170 600 ntBASIC24.05■■□□□ 1.44
TOP2AP11388 SNORA50.1-201ENST00000628590 135 ntBASIC24.05■■□□□ 1.44
TOP2AP11388 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
TOP2AP11388 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TOP2AP11388 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC24.04■■□□□ 1.44
TOP2AP11388 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC24.04■■□□□ 1.44
TOP2AP11388 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
TOP2AP11388 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
TOP2AP11388 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC24.04■■□□□ 1.44
TOP2AP11388 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
TOP2AP11388 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TOP2AP11388 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC24.04■■□□□ 1.44
TOP2AP11388 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
TOP2AP11388 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
TOP2AP11388 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
TOP2AP11388 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC24.04■■□□□ 1.44
TOP2AP11388 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC24.04■■□□□ 1.44
TOP2AP11388 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TOP2AP11388 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TOP2AP11388 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
TOP2AP11388 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC24.04■■□□□ 1.44
TOP2AP11388 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC24.04■■□□□ 1.44
TOP2AP11388 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC24.04■■□□□ 1.44
TOP2AP11388 SNORA47-201ENST00000458862 138 ntBASIC24.04■■□□□ 1.44
TOP2AP11388 URB1-AS1-201ENST00000534991 831 ntBASIC24.04■■□□□ 1.44
TOP2AP11388 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC24.04■■□□□ 1.44
TOP2AP11388 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC24.04■■□□□ 1.44
TOP2AP11388 RN7SL162P-201ENST00000579233 292 ntBASIC24.04■■□□□ 1.44
TOP2AP11388 RN7SL480P-201ENST00000581481 294 ntBASIC24.04■■□□□ 1.44
TOP2AP11388 RPS5-205ENST00000598495 800 ntTSL 3 BASIC24.04■■□□□ 1.44
TOP2AP11388 AP000553.2-201ENST00000609038 441 ntBASIC24.04■■□□□ 1.44
TOP2AP11388 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TOP2AP11388 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TOP2AP11388 AP000437.1-201ENST00000624057 2085 ntBASIC24.03■■□□□ 1.44
TOP2AP11388 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
TOP2AP11388 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TOP2AP11388 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC24.03■■□□□ 1.44
TOP2AP11388 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
TOP2AP11388 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TOP2AP11388 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TOP2AP11388 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TOP2AP11388 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
TOP2AP11388 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TOP2AP11388 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms