Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC11.24□□□□□ -0.61
CD28P10747 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC11.24□□□□□ -0.61
CD28P10747 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
CD28P10747 KRT17P5-201ENST00000332088 839 ntBASIC11.24□□□□□ -0.61
CD28P10747 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC11.24□□□□□ -0.61
CD28P10747 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC11.24□□□□□ -0.61
CD28P10747 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC11.24□□□□□ -0.61
CD28P10747 MIR557-201ENST00000385239 98 ntBASIC11.24□□□□□ -0.61
CD28P10747 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC11.24□□□□□ -0.61
CD28P10747 RPSAP31-201ENST00000416648 895 ntBASIC11.24□□□□□ -0.61
CD28P10747 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC11.24□□□□□ -0.61
CD28P10747 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC11.24□□□□□ -0.61
CD28P10747 AL627422.1-201ENST00000434104 580 ntBASIC11.24□□□□□ -0.61
CD28P10747 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC11.24□□□□□ -0.61
CD28P10747 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
CD28P10747 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
CD28P10747 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC11.24□□□□□ -0.61
CD28P10747 MBP-227ENST00000526111 581 ntTSL 4 BASIC11.24□□□□□ -0.61
CD28P10747 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC11.24□□□□□ -0.61
CD28P10747 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
CD28P10747 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
CD28P10747 AC027237.1-201ENST00000560942 655 ntBASIC11.24□□□□□ -0.61
CD28P10747 AL031713.1-201ENST00000564813 661 ntBASIC11.24□□□□□ -0.61
CD28P10747 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
CD28P10747 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 MIR6842-201ENST00000612539 65 ntBASIC11.24□□□□□ -0.61
CD28P10747 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
CD28P10747 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC11.24□□□□□ -0.61
CD28P10747 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
CD28P10747 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC11.24□□□□□ -0.61
CD28P10747 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
CD28P10747 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC11.24□□□□□ -0.61
CD28P10747 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
CD28P10747 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 SNX18-202ENST00000343017 3140 ntBASIC11.24□□□□□ -0.61
CD28P10747 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC11.24□□□□□ -0.61
CD28P10747 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC11.24□□□□□ -0.61
CD28P10747 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
CD28P10747 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC11.24□□□□□ -0.61
CD28P10747 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
CD28P10747 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CD28P10747 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
CD28P10747 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
CD28P10747 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CD28P10747 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC11.23□□□□□ -0.61
CD28P10747 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CD28P10747 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CD28P10747 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
CD28P10747 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC11.23□□□□□ -0.61
CD28P10747 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC11.23□□□□□ -0.61
CD28P10747 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC11.23□□□□□ -0.61
CD28P10747 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CD28P10747 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CD28P10747 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CD28P10747 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CD28P10747 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
CD28P10747 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CD28P10747 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC11.23□□□□□ -0.61
CD28P10747 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CD28P10747 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
CD28P10747 SOD2-202ENST00000367054 815 ntTSL 2 BASIC11.23□□□□□ -0.61
CD28P10747 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CD28P10747 Z69890.1-201ENST00000382990 339 ntBASIC11.23□□□□□ -0.61
CD28P10747 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CD28P10747 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CD28P10747 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC11.23□□□□□ -0.61
CD28P10747 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC11.23□□□□□ -0.61
CD28P10747 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC11.23□□□□□ -0.61
CD28P10747 NAGK-204ENST00000443872 878 ntTSL 3 BASIC11.23□□□□□ -0.61
CD28P10747 RPL7P35-201ENST00000446943 740 ntBASIC11.23□□□□□ -0.61
CD28P10747 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC11.23□□□□□ -0.61
CD28P10747 CFL1-206ENST00000527344 962 ntTSL 2 BASIC11.23□□□□□ -0.61
CD28P10747 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
CD28P10747 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC11.23□□□□□ -0.61
CD28P10747 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
CD28P10747 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC11.23□□□□□ -0.61
CD28P10747 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
CD28P10747 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC11.23□□□□□ -0.61
CD28P10747 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CD28P10747 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CD28P10747 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms