Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 RN7SL788P-201ENST00000460504 316 ntBASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 KLF17P1-201ENST00000547105 1126 ntBASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 AP005212.2-201ENST00000584979 510 ntBASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 PEBP1P2-201ENST00000603980 558 ntBASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 HELLS-212ENST00000630929 400 ntTSL 5 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 MYO15B-237ENST00000642007 4893 ntBASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 AC064801.2-201ENST00000625052 1303 ntBASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 AC108734.2-201ENST00000420887 1069 ntBASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 OR51A9P-201ENST00000422578 911 ntBASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 RN7SL375P-201ENST00000492442 298 ntBASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 IGHV1-12-201ENST00000518307 205 ntBASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 VENTXP3-201ENST00000546480 773 ntBASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 AC104506.1-201ENST00000609247 429 ntBASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 AC006483.2-201ENST00000609813 515 ntBASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 HMGB1P24-201ENST00000611897 328 ntBASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC187A0A096LP49 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms