Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC127502.1-201ENST00000399971 1502 ntBASIC11.83□□□□□ -0.52
LINC01558Q9Y6Z2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01558Q9Y6Z2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01558Q9Y6Z2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01558Q9Y6Z2 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
LINC01558Q9Y6Z2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
LINC01558Q9Y6Z2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
LINC01558Q9Y6Z2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC01558Q9Y6Z2 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01558Q9Y6Z2 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC11.83□□□□□ -0.52
LINC01558Q9Y6Z2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01558Q9Y6Z2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01558Q9Y6Z2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
LINC01558Q9Y6Z2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC01558Q9Y6Z2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01558Q9Y6Z2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01558Q9Y6Z2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01558Q9Y6Z2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC01558Q9Y6Z2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01558Q9Y6Z2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC01558Q9Y6Z2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01558Q9Y6Z2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01558Q9Y6Z2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC01558Q9Y6Z2 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01558Q9Y6Z2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC01558Q9Y6Z2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01558Q9Y6Z2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01558Q9Y6Z2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
LINC01558Q9Y6Z2 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC01558Q9Y6Z2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01558Q9Y6Z2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
LINC01558Q9Y6Z2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
LINC01558Q9Y6Z2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
LINC01558Q9Y6Z2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC01558Q9Y6Z2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
LINC01558Q9Y6Z2 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01558Q9Y6Z2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01558Q9Y6Z2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01558Q9Y6Z2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC01558Q9Y6Z2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01558Q9Y6Z2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01558Q9Y6Z2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01558Q9Y6Z2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
LINC01558Q9Y6Z2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC01558Q9Y6Z2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC01558Q9Y6Z2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
LINC01558Q9Y6Z2 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC11.8□□□□□ -0.52
LINC01558Q9Y6Z2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
LINC01558Q9Y6Z2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
LINC01558Q9Y6Z2 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01558Q9Y6Z2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01558Q9Y6Z2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01558Q9Y6Z2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01558Q9Y6Z2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01558Q9Y6Z2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01558Q9Y6Z2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01558Q9Y6Z2 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
LINC01558Q9Y6Z2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01558Q9Y6Z2 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01558Q9Y6Z2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01558Q9Y6Z2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01558Q9Y6Z2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01558Q9Y6Z2 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01558Q9Y6Z2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC01558Q9Y6Z2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC01558Q9Y6Z2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01558Q9Y6Z2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01558Q9Y6Z2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01558Q9Y6Z2 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01558Q9Y6Z2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
LINC01558Q9Y6Z2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC11.79□□□□□ -0.52
LINC01558Q9Y6Z2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
LINC01558Q9Y6Z2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01558Q9Y6Z2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01558Q9Y6Z2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC11.79□□□□□ -0.52
LINC01558Q9Y6Z2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC11.79□□□□□ -0.52
LINC01558Q9Y6Z2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC11.79□□□□□ -0.52
LINC01558Q9Y6Z2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01558Q9Y6Z2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01558Q9Y6Z2 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01558Q9Y6Z2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
LINC01558Q9Y6Z2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
LINC01558Q9Y6Z2 C11orf96-202ENST00000528572 1834 ntBASIC11.79□□□□□ -0.52
LINC01558Q9Y6Z2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01558Q9Y6Z2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01558Q9Y6Z2 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01558Q9Y6Z2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
LINC01558Q9Y6Z2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01558Q9Y6Z2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01558Q9Y6Z2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01558Q9Y6Z2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
LINC01558Q9Y6Z2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01558Q9Y6Z2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01558Q9Y6Z2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC11.78□□□□□ -0.52
LINC01558Q9Y6Z2 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01558Q9Y6Z2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01558Q9Y6Z2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01558Q9Y6Z2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
LINC01558Q9Y6Z2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC01558Q9Y6Z2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms