Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDHGB6Q9Y5F9 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGB6Q9Y5F9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
PCDHGB6Q9Y5F9 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
PCDHGB6Q9Y5F9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDHGB6Q9Y5F9 MIR4466-201ENST00000606121 54 ntBASIC21.21■□□□□ 0.99
PCDHGB6Q9Y5F9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
PCDHGB6Q9Y5F9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
PCDHGB6Q9Y5F9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDHGB6Q9Y5F9 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGB6Q9Y5F9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
PCDHGB6Q9Y5F9 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGB6Q9Y5F9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGB6Q9Y5F9 AC004448.1-201ENST00000458332 883 ntBASIC21.2■□□□□ 0.98
PCDHGB6Q9Y5F9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.2■□□□□ 0.98
PCDHGB6Q9Y5F9 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGB6Q9Y5F9 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGB6Q9Y5F9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDHGB6Q9Y5F9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.2■□□□□ 0.98
PCDHGB6Q9Y5F9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.2■□□□□ 0.98
PCDHGB6Q9Y5F9 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGB6Q9Y5F9 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGB6Q9Y5F9 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.19■□□□□ 0.98
PCDHGB6Q9Y5F9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGB6Q9Y5F9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
PCDHGB6Q9Y5F9 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PCDHGB6Q9Y5F9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGB6Q9Y5F9 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDHGB6Q9Y5F9 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB6Q9Y5F9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB6Q9Y5F9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB6Q9Y5F9 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB6Q9Y5F9 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB6Q9Y5F9 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB6Q9Y5F9 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB6Q9Y5F9 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB6Q9Y5F9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB6Q9Y5F9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB6Q9Y5F9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.18■□□□□ 0.98
PCDHGB6Q9Y5F9 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB6Q9Y5F9 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB6Q9Y5F9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB6Q9Y5F9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB6Q9Y5F9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB6Q9Y5F9 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB6Q9Y5F9 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB6Q9Y5F9 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB6Q9Y5F9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PCDHGB6Q9Y5F9 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGB6Q9Y5F9 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGB6Q9Y5F9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDHGB6Q9Y5F9 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGB6Q9Y5F9 AC133561.4-201ENST00000566112 224 ntBASIC21.17■□□□□ 0.98
PCDHGB6Q9Y5F9 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGB6Q9Y5F9 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDHGB6Q9Y5F9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PCDHGB6Q9Y5F9 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PCDHGB6Q9Y5F9 DUSP8P5-201ENST00000422884 1815 ntBASIC21.17■□□□□ 0.98
PCDHGB6Q9Y5F9 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGB6Q9Y5F9 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGB6Q9Y5F9 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGB6Q9Y5F9 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
PCDHGB6Q9Y5F9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDHGB6Q9Y5F9 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGB6Q9Y5F9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGB6Q9Y5F9 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PCDHGB6Q9Y5F9 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
PCDHGB6Q9Y5F9 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGB6Q9Y5F9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDHGB6Q9Y5F9 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGB6Q9Y5F9 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGB6Q9Y5F9 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.15■□□□□ 0.98
PCDHGB6Q9Y5F9 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGB6Q9Y5F9 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHGB6Q9Y5F9 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
PCDHGB6Q9Y5F9 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHGB6Q9Y5F9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHGB6Q9Y5F9 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PCDHGB6Q9Y5F9 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.14■□□□□ 0.97
PCDHGB6Q9Y5F9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGB6Q9Y5F9 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGB6Q9Y5F9 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGB6Q9Y5F9 AC110285.6-201ENST00000617652 491 ntBASIC21.14■□□□□ 0.97
PCDHGB6Q9Y5F9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PCDHGB6Q9Y5F9 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGB6Q9Y5F9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGB6Q9Y5F9 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.13■□□□□ 0.97
PCDHGB6Q9Y5F9 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB6Q9Y5F9 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB6Q9Y5F9 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB6Q9Y5F9 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHGB6Q9Y5F9 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PCDHGB6Q9Y5F9 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHGB6Q9Y5F9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHGB6Q9Y5F9 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB6Q9Y5F9 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB6Q9Y5F9 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB6Q9Y5F9 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB6Q9Y5F9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGB6Q9Y5F9 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms