Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
UBQLN2Q9UHD9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBQLN2Q9UHD9 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.96■□□□□ 0.63
UBQLN2Q9UHD9 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBQLN2Q9UHD9 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBQLN2Q9UHD9 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBQLN2Q9UHD9 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.96■□□□□ 0.63
UBQLN2Q9UHD9 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBQLN2Q9UHD9 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
UBQLN2Q9UHD9 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBQLN2Q9UHD9 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBQLN2Q9UHD9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBQLN2Q9UHD9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
UBQLN2Q9UHD9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN2Q9UHD9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
UBQLN2Q9UHD9 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN2Q9UHD9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN2Q9UHD9 MIR639-201ENST00000384974 98 ntBASIC18.95■□□□□ 0.62
UBQLN2Q9UHD9 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
UBQLN2Q9UHD9 AC242852.2-201ENST00000615738 1807 ntBASIC18.95■□□□□ 0.62
UBQLN2Q9UHD9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.95■□□□□ 0.62
UBQLN2Q9UHD9 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN2Q9UHD9 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.94■□□□□ 0.62
UBQLN2Q9UHD9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN2Q9UHD9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.94■□□□□ 0.62
UBQLN2Q9UHD9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN2Q9UHD9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN2Q9UHD9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN2Q9UHD9 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
UBQLN2Q9UHD9 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.94■□□□□ 0.62
UBQLN2Q9UHD9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
UBQLN2Q9UHD9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
UBQLN2Q9UHD9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
UBQLN2Q9UHD9 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN2Q9UHD9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN2Q9UHD9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN2Q9UHD9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN2Q9UHD9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN2Q9UHD9 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN2Q9UHD9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN2Q9UHD9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN2Q9UHD9 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
UBQLN2Q9UHD9 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN2Q9UHD9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN2Q9UHD9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN2Q9UHD9 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN2Q9UHD9 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN2Q9UHD9 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN2Q9UHD9 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN2Q9UHD9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN2Q9UHD9 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
UBQLN2Q9UHD9 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
UBQLN2Q9UHD9 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN2Q9UHD9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN2Q9UHD9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN2Q9UHD9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN2Q9UHD9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN2Q9UHD9 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN2Q9UHD9 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.92■□□□□ 0.62
UBQLN2Q9UHD9 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.92■□□□□ 0.62
UBQLN2Q9UHD9 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN2Q9UHD9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.92■□□□□ 0.62
UBQLN2Q9UHD9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN2Q9UHD9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
UBQLN2Q9UHD9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN2Q9UHD9 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN2Q9UHD9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN2Q9UHD9 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.92■□□□□ 0.62
UBQLN2Q9UHD9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN2Q9UHD9 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN2Q9UHD9 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN2Q9UHD9 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.92■□□□□ 0.62
UBQLN2Q9UHD9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.92■□□□□ 0.62
UBQLN2Q9UHD9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN2Q9UHD9 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN2Q9UHD9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN2Q9UHD9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
UBQLN2Q9UHD9 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN2Q9UHD9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
UBQLN2Q9UHD9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.91■□□□□ 0.62
UBQLN2Q9UHD9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.91■□□□□ 0.62
UBQLN2Q9UHD9 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN2Q9UHD9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN2Q9UHD9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN2Q9UHD9 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
UBQLN2Q9UHD9 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN2Q9UHD9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBQLN2Q9UHD9 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN2Q9UHD9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.9■□□□□ 0.62
UBQLN2Q9UHD9 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN2Q9UHD9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN2Q9UHD9 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN2Q9UHD9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN2Q9UHD9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN2Q9UHD9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.9■□□□□ 0.62
UBQLN2Q9UHD9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN2Q9UHD9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
UBQLN2Q9UHD9 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.9■□□□□ 0.62
UBQLN2Q9UHD9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBQLN2Q9UHD9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms