Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.4■□□□□ 0.86
HMG20AQ9NP66 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMG20AQ9NP66 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMG20AQ9NP66 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMG20AQ9NP66 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMG20AQ9NP66 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HMG20AQ9NP66 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
HMG20AQ9NP66 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMG20AQ9NP66 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
HMG20AQ9NP66 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
HMG20AQ9NP66 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.4■□□□□ 0.86
HMG20AQ9NP66 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HMG20AQ9NP66 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HMG20AQ9NP66 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.4■□□□□ 0.86
HMG20AQ9NP66 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
HMG20AQ9NP66 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HMG20AQ9NP66 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HMG20AQ9NP66 ANOS2P-203ENST00000472227 1816 ntBASIC20.39■□□□□ 0.86
HMG20AQ9NP66 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
HMG20AQ9NP66 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.39■□□□□ 0.86
HMG20AQ9NP66 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HMG20AQ9NP66 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HMG20AQ9NP66 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
HMG20AQ9NP66 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMG20AQ9NP66 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HMG20AQ9NP66 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.39■□□□□ 0.85
HMG20AQ9NP66 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMG20AQ9NP66 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMG20AQ9NP66 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.39■□□□□ 0.85
HMG20AQ9NP66 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.39■□□□□ 0.85
HMG20AQ9NP66 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.39■□□□□ 0.85
HMG20AQ9NP66 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.39■□□□□ 0.85
HMG20AQ9NP66 AC242852.2-201ENST00000615738 1807 ntBASIC20.39■□□□□ 0.85
HMG20AQ9NP66 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
HMG20AQ9NP66 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMG20AQ9NP66 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.38■□□□□ 0.85
HMG20AQ9NP66 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMG20AQ9NP66 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMG20AQ9NP66 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMG20AQ9NP66 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMG20AQ9NP66 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.38■□□□□ 0.85
HMG20AQ9NP66 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
HMG20AQ9NP66 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.37■□□□□ 0.85
HMG20AQ9NP66 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
HMG20AQ9NP66 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMG20AQ9NP66 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.37■□□□□ 0.85
HMG20AQ9NP66 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMG20AQ9NP66 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMG20AQ9NP66 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMG20AQ9NP66 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HMG20AQ9NP66 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HMG20AQ9NP66 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.37■□□□□ 0.85
HMG20AQ9NP66 AC025884.2-201ENST00000553429 711 ntBASIC20.37■□□□□ 0.85
HMG20AQ9NP66 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.37■□□□□ 0.85
HMG20AQ9NP66 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
HMG20AQ9NP66 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
HMG20AQ9NP66 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.37■□□□□ 0.85
HMG20AQ9NP66 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.37■□□□□ 0.85
HMG20AQ9NP66 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMG20AQ9NP66 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMG20AQ9NP66 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
HMG20AQ9NP66 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HMG20AQ9NP66 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HMG20AQ9NP66 AC073130.3-201ENST00000624389 2278 ntBASIC20.36■□□□□ 0.85
HMG20AQ9NP66 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.36■□□□□ 0.85
HMG20AQ9NP66 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.36■□□□□ 0.85
HMG20AQ9NP66 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMG20AQ9NP66 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMG20AQ9NP66 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMG20AQ9NP66 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMG20AQ9NP66 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.36■□□□□ 0.85
HMG20AQ9NP66 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMG20AQ9NP66 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMG20AQ9NP66 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMG20AQ9NP66 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.35■□□□□ 0.85
HMG20AQ9NP66 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMG20AQ9NP66 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMG20AQ9NP66 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HMG20AQ9NP66 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMG20AQ9NP66 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMG20AQ9NP66 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
HMG20AQ9NP66 AC092296.2-201ENST00000589470 999 ntBASIC20.35■□□□□ 0.85
HMG20AQ9NP66 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMG20AQ9NP66 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HMG20AQ9NP66 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMG20AQ9NP66 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMG20AQ9NP66 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMG20AQ9NP66 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
HMG20AQ9NP66 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMG20AQ9NP66 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
HMG20AQ9NP66 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HMG20AQ9NP66 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
HMG20AQ9NP66 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMG20AQ9NP66 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HMG20AQ9NP66 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMG20AQ9NP66 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMG20AQ9NP66 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.34■□□□□ 0.85
HMG20AQ9NP66 AC092068.2-201ENST00000590491 1708 ntBASIC20.34■□□□□ 0.85
HMG20AQ9NP66 AC092667.1-201ENST00000434301 2586 ntBASIC20.34■□□□□ 0.85
HMG20AQ9NP66 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms