Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC46A1Q96NT5 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLC46A1Q96NT5 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC46A1Q96NT5 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC46A1Q96NT5 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC46A1Q96NT5 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SLC46A1Q96NT5 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC46A1Q96NT5 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC46A1Q96NT5 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC46A1Q96NT5 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLC46A1Q96NT5 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLC46A1Q96NT5 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.66■■□□□ 1.06
SLC46A1Q96NT5 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLC46A1Q96NT5 MIR3181-201ENST00000578512 73 ntBASIC21.66■■□□□ 1.06
SLC46A1Q96NT5 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.66■■□□□ 1.06
SLC46A1Q96NT5 RARRES2P11-201ENST00000635158 484 ntBASIC21.66■■□□□ 1.06
SLC46A1Q96NT5 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC46A1Q96NT5 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SLC46A1Q96NT5 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC46A1Q96NT5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC46A1Q96NT5 AC006455.2-201ENST00000429931 906 ntBASIC21.65■■□□□ 1.06
SLC46A1Q96NT5 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.65■■□□□ 1.06
SLC46A1Q96NT5 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.65■■□□□ 1.06
SLC46A1Q96NT5 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC46A1Q96NT5 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.65■■□□□ 1.06
SLC46A1Q96NT5 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SLC46A1Q96NT5 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.65■■□□□ 1.06
SLC46A1Q96NT5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC46A1Q96NT5 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC46A1Q96NT5 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SLC46A1Q96NT5 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SLC46A1Q96NT5 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.64■■□□□ 1.05
SLC46A1Q96NT5 AC090192.1-201ENST00000517740 490 ntBASIC21.64■■□□□ 1.05
SLC46A1Q96NT5 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SLC46A1Q96NT5 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SLC46A1Q96NT5 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC46A1Q96NT5 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SLC46A1Q96NT5 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC46A1Q96NT5 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.63■■□□□ 1.05
SLC46A1Q96NT5 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC46A1Q96NT5 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SLC46A1Q96NT5 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC46A1Q96NT5 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
SLC46A1Q96NT5 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.63■■□□□ 1.05
SLC46A1Q96NT5 AC022517.1-201ENST00000592429 346 ntBASIC21.63■■□□□ 1.05
SLC46A1Q96NT5 AC009086.3-201ENST00000623486 1008 ntBASIC21.63■■□□□ 1.05
SLC46A1Q96NT5 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SLC46A1Q96NT5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SLC46A1Q96NT5 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SLC46A1Q96NT5 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.63■■□□□ 1.05
SLC46A1Q96NT5 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC46A1Q96NT5 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SLC46A1Q96NT5 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC46A1Q96NT5 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC46A1Q96NT5 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC46A1Q96NT5 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.62■■□□□ 1.05
SLC46A1Q96NT5 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC46A1Q96NT5 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.62■■□□□ 1.05
SLC46A1Q96NT5 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC46A1Q96NT5 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.62■■□□□ 1.05
SLC46A1Q96NT5 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.62■■□□□ 1.05
SLC46A1Q96NT5 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC46A1Q96NT5 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
SLC46A1Q96NT5 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC46A1Q96NT5 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.61■■□□□ 1.05
SLC46A1Q96NT5 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC46A1Q96NT5 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SLC46A1Q96NT5 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SLC46A1Q96NT5 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.61■■□□□ 1.05
SLC46A1Q96NT5 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.61■■□□□ 1.05
SLC46A1Q96NT5 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
SLC46A1Q96NT5 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
SLC46A1Q96NT5 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.61■■□□□ 1.05
SLC46A1Q96NT5 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.61■■□□□ 1.05
SLC46A1Q96NT5 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.61■■□□□ 1.05
SLC46A1Q96NT5 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC46A1Q96NT5 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.6■■□□□ 1.05
SLC46A1Q96NT5 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC46A1Q96NT5 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC46A1Q96NT5 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.6■■□□□ 1.05
SLC46A1Q96NT5 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.6■■□□□ 1.05
SLC46A1Q96NT5 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.6■■□□□ 1.05
SLC46A1Q96NT5 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SLC46A1Q96NT5 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.6■■□□□ 1.05
SLC46A1Q96NT5 IKBKGP1-201ENST00000612193 1073 ntBASIC21.6■■□□□ 1.05
SLC46A1Q96NT5 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.6■■□□□ 1.05
SLC46A1Q96NT5 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC46A1Q96NT5 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.59■■□□□ 1.05
SLC46A1Q96NT5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SLC46A1Q96NT5 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.59■■□□□ 1.05
SLC46A1Q96NT5 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.59■■□□□ 1.05
SLC46A1Q96NT5 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.59■■□□□ 1.05
SLC46A1Q96NT5 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.59■■□□□ 1.05
SLC46A1Q96NT5 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC46A1Q96NT5 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SLC46A1Q96NT5 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.58■■□□□ 1.05
SLC46A1Q96NT5 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.58■■□□□ 1.05
SLC46A1Q96NT5 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC46A1Q96NT5 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
SLC46A1Q96NT5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms