Protein–RNA interactions for Protein: Q8WV41

SNX33, Sorting nexin-33, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX33Q8WV41 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SNX33Q8WV41 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.27■□□□□ 0.83
SNX33Q8WV41 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.27■□□□□ 0.83
SNX33Q8WV41 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.27■□□□□ 0.83
SNX33Q8WV41 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX33Q8WV41 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.26■□□□□ 0.83
SNX33Q8WV41 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.26■□□□□ 0.83
SNX33Q8WV41 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX33Q8WV41 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
SNX33Q8WV41 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX33Q8WV41 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.26■□□□□ 0.83
SNX33Q8WV41 AL592295.1-201ENST00000400984 884 ntBASIC20.26■□□□□ 0.83
SNX33Q8WV41 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX33Q8WV41 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.26■□□□□ 0.83
SNX33Q8WV41 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.26■□□□□ 0.83
SNX33Q8WV41 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX33Q8WV41 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX33Q8WV41 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX33Q8WV41 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX33Q8WV41 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNX33Q8WV41 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNX33Q8WV41 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNX33Q8WV41 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
SNX33Q8WV41 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNX33Q8WV41 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNX33Q8WV41 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNX33Q8WV41 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNX33Q8WV41 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SNX33Q8WV41 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SNX33Q8WV41 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.25■□□□□ 0.83
SNX33Q8WV41 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SNX33Q8WV41 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNX33Q8WV41 AC092068.2-201ENST00000590491 1708 ntBASIC20.24■□□□□ 0.83
SNX33Q8WV41 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNX33Q8WV41 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.24■□□□□ 0.83
SNX33Q8WV41 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.24■□□□□ 0.83
SNX33Q8WV41 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SNX33Q8WV41 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.24■□□□□ 0.83
SNX33Q8WV41 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNX33Q8WV41 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNX33Q8WV41 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.24■□□□□ 0.83
SNX33Q8WV41 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SNX33Q8WV41 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SNX33Q8WV41 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.24■□□□□ 0.83
SNX33Q8WV41 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNX33Q8WV41 AC233723.2-201ENST00000623798 2106 ntBASIC20.24■□□□□ 0.83
SNX33Q8WV41 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.24■□□□□ 0.83
SNX33Q8WV41 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SNX33Q8WV41 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNX33Q8WV41 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNX33Q8WV41 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNX33Q8WV41 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNX33Q8WV41 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNX33Q8WV41 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SNX33Q8WV41 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.23■□□□□ 0.83
SNX33Q8WV41 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.23■□□□□ 0.83
SNX33Q8WV41 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SNX33Q8WV41 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNX33Q8WV41 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNX33Q8WV41 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SNX33Q8WV41 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SNX33Q8WV41 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.22■□□□□ 0.83
SNX33Q8WV41 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNX33Q8WV41 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.22■□□□□ 0.83
SNX33Q8WV41 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNX33Q8WV41 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SNX33Q8WV41 AC103834.1-201ENST00000520383 144 ntBASIC20.22■□□□□ 0.83
SNX33Q8WV41 AL031848.2-201ENST00000607670 837 ntBASIC20.22■□□□□ 0.83
SNX33Q8WV41 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNX33Q8WV41 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SNX33Q8WV41 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNX33Q8WV41 DUSP8P3-201ENST00000399571 1760 ntBASIC20.21■□□□□ 0.83
SNX33Q8WV41 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNX33Q8WV41 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNX33Q8WV41 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNX33Q8WV41 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNX33Q8WV41 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNX33Q8WV41 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SNX33Q8WV41 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNX33Q8WV41 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SNX33Q8WV41 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNX33Q8WV41 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNX33Q8WV41 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNX33Q8WV41 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNX33Q8WV41 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.2■□□□□ 0.82
SNX33Q8WV41 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNX33Q8WV41 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNX33Q8WV41 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SNX33Q8WV41 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
SNX33Q8WV41 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SNX33Q8WV41 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNX33Q8WV41 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SNX33Q8WV41 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SNX33Q8WV41 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SNX33Q8WV41 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNX33Q8WV41 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNX33Q8WV41 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNX33Q8WV41 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.19■□□□□ 0.82
SNX33Q8WV41 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.19■□□□□ 0.82
SNX33Q8WV41 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms