Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.7■■□□□ 1.38
RNF139Q8WU17 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RNF139Q8WU17 MIR4466-201ENST00000606121 54 ntBASIC23.7■■□□□ 1.38
RNF139Q8WU17 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RNF139Q8WU17 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RNF139Q8WU17 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RNF139Q8WU17 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RNF139Q8WU17 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF139Q8WU17 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF139Q8WU17 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF139Q8WU17 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RNF139Q8WU17 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.69■■□□□ 1.38
RNF139Q8WU17 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
RNF139Q8WU17 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RNF139Q8WU17 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.68■■□□□ 1.38
RNF139Q8WU17 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF139Q8WU17 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF139Q8WU17 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
RNF139Q8WU17 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
RNF139Q8WU17 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.68■■□□□ 1.38
RNF139Q8WU17 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF139Q8WU17 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RNF139Q8WU17 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF139Q8WU17 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF139Q8WU17 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.68■■□□□ 1.38
RNF139Q8WU17 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RNF139Q8WU17 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.68■■□□□ 1.38
RNF139Q8WU17 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
RNF139Q8WU17 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF139Q8WU17 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF139Q8WU17 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF139Q8WU17 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.66■■□□□ 1.38
RNF139Q8WU17 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF139Q8WU17 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
RNF139Q8WU17 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RNF139Q8WU17 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
RNF139Q8WU17 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.66■■□□□ 1.38
RNF139Q8WU17 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RNF139Q8WU17 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF139Q8WU17 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF139Q8WU17 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.65■■□□□ 1.38
RNF139Q8WU17 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.65■■□□□ 1.38
RNF139Q8WU17 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
RNF139Q8WU17 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF139Q8WU17 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF139Q8WU17 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.65■■□□□ 1.38
RNF139Q8WU17 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RNF139Q8WU17 SRD5A1P1-201ENST00000442297 786 ntBASIC23.65■■□□□ 1.38
RNF139Q8WU17 AC009102.2-201ENST00000606772 1639 ntBASIC23.65■■□□□ 1.38
RNF139Q8WU17 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.65■■□□□ 1.38
RNF139Q8WU17 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RNF139Q8WU17 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RNF139Q8WU17 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RNF139Q8WU17 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.64■■□□□ 1.38
RNF139Q8WU17 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.64■■□□□ 1.37
RNF139Q8WU17 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.64■■□□□ 1.37
RNF139Q8WU17 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF139Q8WU17 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF139Q8WU17 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF139Q8WU17 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF139Q8WU17 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF139Q8WU17 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.64■■□□□ 1.37
RNF139Q8WU17 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF139Q8WU17 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
RNF139Q8WU17 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF139Q8WU17 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF139Q8WU17 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF139Q8WU17 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RNF139Q8WU17 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.63■■□□□ 1.37
RNF139Q8WU17 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF139Q8WU17 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RNF139Q8WU17 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.63■■□□□ 1.37
RNF139Q8WU17 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF139Q8WU17 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
RNF139Q8WU17 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
RNF139Q8WU17 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF139Q8WU17 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.62■■□□□ 1.37
RNF139Q8WU17 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.62■■□□□ 1.37
RNF139Q8WU17 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RNF139Q8WU17 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.62■■□□□ 1.37
RNF139Q8WU17 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.62■■□□□ 1.37
RNF139Q8WU17 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF139Q8WU17 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RNF139Q8WU17 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF139Q8WU17 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RNF139Q8WU17 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF139Q8WU17 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.61■■□□□ 1.37
RNF139Q8WU17 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.61■■□□□ 1.37
RNF139Q8WU17 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF139Q8WU17 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
RNF139Q8WU17 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
RNF139Q8WU17 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF139Q8WU17 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF139Q8WU17 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF139Q8WU17 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF139Q8WU17 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.6■■□□□ 1.37
RNF139Q8WU17 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.6■■□□□ 1.37
RNF139Q8WU17 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.6■■□□□ 1.37
RNF139Q8WU17 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
RNF139Q8WU17 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms