Protein–RNA interactions for Protein: Q8N9B8

RASGEF1A, Ras-GEF domain-containing family member 1A, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1AQ8N9B8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.3■■□□□ 1.16
RASGEF1AQ8N9B8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.3■■□□□ 1.16
RASGEF1AQ8N9B8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RASGEF1AQ8N9B8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RASGEF1AQ8N9B8 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
RASGEF1AQ8N9B8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RASGEF1AQ8N9B8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
RASGEF1AQ8N9B8 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RASGEF1AQ8N9B8 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
RASGEF1AQ8N9B8 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RASGEF1AQ8N9B8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.29■■□□□ 1.16
RASGEF1AQ8N9B8 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RASGEF1AQ8N9B8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
RASGEF1AQ8N9B8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
RASGEF1AQ8N9B8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.28■■□□□ 1.16
RASGEF1AQ8N9B8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.28■■□□□ 1.16
RASGEF1AQ8N9B8 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RASGEF1AQ8N9B8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.28■■□□□ 1.16
RASGEF1AQ8N9B8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RASGEF1AQ8N9B8 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
RASGEF1AQ8N9B8 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
RASGEF1AQ8N9B8 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RASGEF1AQ8N9B8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RASGEF1AQ8N9B8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.27■■□□□ 1.16
RASGEF1AQ8N9B8 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RASGEF1AQ8N9B8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RASGEF1AQ8N9B8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RASGEF1AQ8N9B8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
RASGEF1AQ8N9B8 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
RASGEF1AQ8N9B8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.15
RASGEF1AQ8N9B8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RASGEF1AQ8N9B8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RASGEF1AQ8N9B8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RASGEF1AQ8N9B8 AC008406.3-201ENST00000620001 1374 ntBASIC22.26■■□□□ 1.15
RASGEF1AQ8N9B8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RASGEF1AQ8N9B8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RASGEF1AQ8N9B8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
RASGEF1AQ8N9B8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RASGEF1AQ8N9B8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RASGEF1AQ8N9B8 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.26■■□□□ 1.15
RASGEF1AQ8N9B8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RASGEF1AQ8N9B8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
RASGEF1AQ8N9B8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RASGEF1AQ8N9B8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RASGEF1AQ8N9B8 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RASGEF1AQ8N9B8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.25■■□□□ 1.15
RASGEF1AQ8N9B8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RASGEF1AQ8N9B8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.25■■□□□ 1.15
RASGEF1AQ8N9B8 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RASGEF1AQ8N9B8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.25■■□□□ 1.15
RASGEF1AQ8N9B8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RASGEF1AQ8N9B8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RASGEF1AQ8N9B8 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RASGEF1AQ8N9B8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.24■■□□□ 1.15
RASGEF1AQ8N9B8 AL136116.3-201ENST00000402907 1138 ntBASIC22.24■■□□□ 1.15
RASGEF1AQ8N9B8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
RASGEF1AQ8N9B8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.24■■□□□ 1.15
RASGEF1AQ8N9B8 C17orf82-201ENST00000623772 1530 ntBASIC22.24■■□□□ 1.15
RASGEF1AQ8N9B8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RASGEF1AQ8N9B8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RASGEF1AQ8N9B8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.24■■□□□ 1.15
RASGEF1AQ8N9B8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RASGEF1AQ8N9B8 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RASGEF1AQ8N9B8 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RASGEF1AQ8N9B8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RASGEF1AQ8N9B8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RASGEF1AQ8N9B8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RASGEF1AQ8N9B8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.23■■□□□ 1.15
RASGEF1AQ8N9B8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.23■■□□□ 1.15
RASGEF1AQ8N9B8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RASGEF1AQ8N9B8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.23■■□□□ 1.15
RASGEF1AQ8N9B8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RASGEF1AQ8N9B8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
RASGEF1AQ8N9B8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
RASGEF1AQ8N9B8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
RASGEF1AQ8N9B8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.22■■□□□ 1.15
RASGEF1AQ8N9B8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RASGEF1AQ8N9B8 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RASGEF1AQ8N9B8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.22■■□□□ 1.15
RASGEF1AQ8N9B8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
RASGEF1AQ8N9B8 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RASGEF1AQ8N9B8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RASGEF1AQ8N9B8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
RASGEF1AQ8N9B8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.21■■□□□ 1.15
RASGEF1AQ8N9B8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
RASGEF1AQ8N9B8 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RASGEF1AQ8N9B8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RASGEF1AQ8N9B8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RASGEF1AQ8N9B8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RASGEF1AQ8N9B8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
RASGEF1AQ8N9B8 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.2■■□□□ 1.15
RASGEF1AQ8N9B8 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RASGEF1AQ8N9B8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.2■■□□□ 1.14
RASGEF1AQ8N9B8 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.2■■□□□ 1.14
RASGEF1AQ8N9B8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RASGEF1AQ8N9B8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.2■■□□□ 1.14
RASGEF1AQ8N9B8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
RASGEF1AQ8N9B8 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RASGEF1AQ8N9B8 SRD5A1P1-201ENST00000442297 786 ntBASIC22.2■■□□□ 1.14
RASGEF1AQ8N9B8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms