Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.62
DHX40Q8IX18 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
DHX40Q8IX18 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC25.2■■□□□ 1.62
DHX40Q8IX18 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
DHX40Q8IX18 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
DHX40Q8IX18 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
DHX40Q8IX18 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
DHX40Q8IX18 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
DHX40Q8IX18 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
DHX40Q8IX18 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
DHX40Q8IX18 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
DHX40Q8IX18 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
DHX40Q8IX18 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC25.19■■□□□ 1.62
DHX40Q8IX18 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
DHX40Q8IX18 AC127496.7-201ENST00000625110 1798 ntBASIC25.18■■□□□ 1.62
DHX40Q8IX18 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
DHX40Q8IX18 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
DHX40Q8IX18 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
DHX40Q8IX18 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC25.18■■□□□ 1.62
DHX40Q8IX18 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
DHX40Q8IX18 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
DHX40Q8IX18 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
DHX40Q8IX18 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
DHX40Q8IX18 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC25.18■■□□□ 1.62
DHX40Q8IX18 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
DHX40Q8IX18 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC25.17■■□□□ 1.62
DHX40Q8IX18 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.17■■□□□ 1.62
DHX40Q8IX18 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC25.17■■□□□ 1.62
DHX40Q8IX18 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
DHX40Q8IX18 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
DHX40Q8IX18 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
DHX40Q8IX18 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
DHX40Q8IX18 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
DHX40Q8IX18 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
DHX40Q8IX18 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
DHX40Q8IX18 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
DHX40Q8IX18 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.16■■□□□ 1.62
DHX40Q8IX18 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC25.16■■□□□ 1.62
DHX40Q8IX18 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
DHX40Q8IX18 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
DHX40Q8IX18 WWC2-AS2-201ENST00000578387 2183 ntBASIC25.15■■□□□ 1.62
DHX40Q8IX18 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC25.15■■□□□ 1.62
DHX40Q8IX18 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
DHX40Q8IX18 KRT18P60-201ENST00000312876 1297 ntBASIC25.15■■□□□ 1.62
DHX40Q8IX18 LONRF2P2-201ENST00000439212 571 ntBASIC25.15■■□□□ 1.62
DHX40Q8IX18 DUX4L9-201ENST00000449051 1259 ntBASIC25.15■■□□□ 1.62
DHX40Q8IX18 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
DHX40Q8IX18 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
DHX40Q8IX18 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
DHX40Q8IX18 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
DHX40Q8IX18 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.15■■□□□ 1.62
DHX40Q8IX18 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC25.15■■□□□ 1.62
DHX40Q8IX18 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
DHX40Q8IX18 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
DHX40Q8IX18 MIR6765-201ENST00000614092 87 ntBASIC25.14■■□□□ 1.62
DHX40Q8IX18 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
DHX40Q8IX18 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
DHX40Q8IX18 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC25.14■■□□□ 1.61
DHX40Q8IX18 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
DHX40Q8IX18 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.13■■□□□ 1.61
DHX40Q8IX18 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC25.13■■□□□ 1.61
DHX40Q8IX18 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC25.13■■□□□ 1.61
DHX40Q8IX18 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
DHX40Q8IX18 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
DHX40Q8IX18 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
DHX40Q8IX18 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
DHX40Q8IX18 AC137767.1-201ENST00000602918 1920 ntBASIC25.12■■□□□ 1.61
DHX40Q8IX18 AL033527.3-201ENST00000566366 1196 ntBASIC25.12■■□□□ 1.61
DHX40Q8IX18 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC25.12■■□□□ 1.61
DHX40Q8IX18 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
DHX40Q8IX18 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
DHX40Q8IX18 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
DHX40Q8IX18 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
DHX40Q8IX18 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
DHX40Q8IX18 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
DHX40Q8IX18 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
DHX40Q8IX18 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
DHX40Q8IX18 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
DHX40Q8IX18 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
DHX40Q8IX18 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
DHX40Q8IX18 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
DHX40Q8IX18 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.11■■□□□ 1.61
DHX40Q8IX18 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.11■■□□□ 1.61
DHX40Q8IX18 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
DHX40Q8IX18 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
DHX40Q8IX18 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC25.11■■□□□ 1.61
DHX40Q8IX18 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.11■■□□□ 1.61
DHX40Q8IX18 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
DHX40Q8IX18 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
DHX40Q8IX18 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
DHX40Q8IX18 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
DHX40Q8IX18 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
DHX40Q8IX18 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
DHX40Q8IX18 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
DHX40Q8IX18 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC25.09■■□□□ 1.61
DHX40Q8IX18 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
DHX40Q8IX18 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC25.09■■□□□ 1.61
DHX40Q8IX18 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
DHX40Q8IX18 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
DHX40Q8IX18 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms