Protein–RNA interactions for Protein: Q86YD5

LDLRAD3, Low-density lipoprotein receptor class A domain-containing protein 3, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3Q86YD5 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
LDLRAD3Q86YD5 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.14■□□□□ 0.65
LDLRAD3Q86YD5 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LDLRAD3Q86YD5 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LDLRAD3Q86YD5 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LDLRAD3Q86YD5 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.14■□□□□ 0.65
LDLRAD3Q86YD5 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LDLRAD3Q86YD5 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.14■□□□□ 0.65
LDLRAD3Q86YD5 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LDLRAD3Q86YD5 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LDLRAD3Q86YD5 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.14■□□□□ 0.65
LDLRAD3Q86YD5 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.14■□□□□ 0.65
LDLRAD3Q86YD5 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LDLRAD3Q86YD5 C9orf163-202ENST00000624034 2573 ntBASIC19.13■□□□□ 0.65
LDLRAD3Q86YD5 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LDLRAD3Q86YD5 BX664725.1-201ENST00000438252 379 ntBASIC19.13■□□□□ 0.65
LDLRAD3Q86YD5 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
LDLRAD3Q86YD5 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.13■□□□□ 0.65
LDLRAD3Q86YD5 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
LDLRAD3Q86YD5 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LDLRAD3Q86YD5 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LDLRAD3Q86YD5 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.13■□□□□ 0.65
LDLRAD3Q86YD5 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LDLRAD3Q86YD5 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LDLRAD3Q86YD5 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LDLRAD3Q86YD5 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.13■□□□□ 0.65
LDLRAD3Q86YD5 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.13■□□□□ 0.65
LDLRAD3Q86YD5 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LDLRAD3Q86YD5 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LDLRAD3Q86YD5 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LDLRAD3Q86YD5 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
LDLRAD3Q86YD5 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDLRAD3Q86YD5 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.12■□□□□ 0.65
LDLRAD3Q86YD5 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDLRAD3Q86YD5 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LDLRAD3Q86YD5 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.12■□□□□ 0.65
LDLRAD3Q86YD5 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDLRAD3Q86YD5 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.12■□□□□ 0.65
LDLRAD3Q86YD5 KRT125P-201ENST00000546827 989 ntBASIC19.12■□□□□ 0.65
LDLRAD3Q86YD5 AC120024.1-201ENST00000562672 995 ntBASIC19.12■□□□□ 0.65
LDLRAD3Q86YD5 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.12■□□□□ 0.65
LDLRAD3Q86YD5 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.12■□□□□ 0.65
LDLRAD3Q86YD5 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDLRAD3Q86YD5 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.12■□□□□ 0.65
LDLRAD3Q86YD5 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LDLRAD3Q86YD5 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LDLRAD3Q86YD5 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.11■□□□□ 0.65
LDLRAD3Q86YD5 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LDLRAD3Q86YD5 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LDLRAD3Q86YD5 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LDLRAD3Q86YD5 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.11■□□□□ 0.65
LDLRAD3Q86YD5 C1orf229-201ENST00000623686 2258 ntBASIC19.11■□□□□ 0.65
LDLRAD3Q86YD5 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
LDLRAD3Q86YD5 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
LDLRAD3Q86YD5 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.11■□□□□ 0.65
LDLRAD3Q86YD5 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.11■□□□□ 0.65
LDLRAD3Q86YD5 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.11■□□□□ 0.65
LDLRAD3Q86YD5 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.11■□□□□ 0.65
LDLRAD3Q86YD5 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.11■□□□□ 0.65
LDLRAD3Q86YD5 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.11■□□□□ 0.65
LDLRAD3Q86YD5 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LDLRAD3Q86YD5 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LDLRAD3Q86YD5 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.1■□□□□ 0.65
LDLRAD3Q86YD5 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
LDLRAD3Q86YD5 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.1■□□□□ 0.65
LDLRAD3Q86YD5 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LDLRAD3Q86YD5 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
LDLRAD3Q86YD5 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
LDLRAD3Q86YD5 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
LDLRAD3Q86YD5 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
LDLRAD3Q86YD5 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LDLRAD3Q86YD5 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LDLRAD3Q86YD5 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
LDLRAD3Q86YD5 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.09■□□□□ 0.65
LDLRAD3Q86YD5 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LDLRAD3Q86YD5 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LDLRAD3Q86YD5 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LDLRAD3Q86YD5 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.09■□□□□ 0.65
LDLRAD3Q86YD5 AC137630.3-201ENST00000607245 391 ntBASIC19.09■□□□□ 0.65
LDLRAD3Q86YD5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.09■□□□□ 0.65
LDLRAD3Q86YD5 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
LDLRAD3Q86YD5 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LDLRAD3Q86YD5 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LDLRAD3Q86YD5 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LDLRAD3Q86YD5 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
LDLRAD3Q86YD5 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
LDLRAD3Q86YD5 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.08■□□□□ 0.65
LDLRAD3Q86YD5 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
LDLRAD3Q86YD5 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
LDLRAD3Q86YD5 AC011551.1-201ENST00000614101 683 ntBASIC19.08■□□□□ 0.64
LDLRAD3Q86YD5 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LDLRAD3Q86YD5 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
LDLRAD3Q86YD5 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LDLRAD3Q86YD5 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.08■□□□□ 0.64
LDLRAD3Q86YD5 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
LDLRAD3Q86YD5 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
LDLRAD3Q86YD5 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LDLRAD3Q86YD5 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LDLRAD3Q86YD5 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
LDLRAD3Q86YD5 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms