Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF44Q7L0R7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
RNF44Q7L0R7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF44Q7L0R7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.64■■□□□ 1.05
RNF44Q7L0R7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF44Q7L0R7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF44Q7L0R7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF44Q7L0R7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF44Q7L0R7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.63■■□□□ 1.05
RNF44Q7L0R7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RNF44Q7L0R7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF44Q7L0R7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RNF44Q7L0R7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF44Q7L0R7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF44Q7L0R7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RNF44Q7L0R7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RNF44Q7L0R7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF44Q7L0R7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
RNF44Q7L0R7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF44Q7L0R7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RNF44Q7L0R7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.62■■□□□ 1.05
RNF44Q7L0R7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF44Q7L0R7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
RNF44Q7L0R7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.62■■□□□ 1.05
RNF44Q7L0R7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RNF44Q7L0R7 ABCB10P4-201ENST00000566803 2184 ntBASIC21.61■■□□□ 1.05
RNF44Q7L0R7 C17orf82-201ENST00000623772 1530 ntBASIC21.61■■□□□ 1.05
RNF44Q7L0R7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF44Q7L0R7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF44Q7L0R7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF44Q7L0R7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.61■■□□□ 1.05
RNF44Q7L0R7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.61■■□□□ 1.05
RNF44Q7L0R7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.61■■□□□ 1.05
RNF44Q7L0R7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF44Q7L0R7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF44Q7L0R7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF44Q7L0R7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.6■■□□□ 1.05
RNF44Q7L0R7 SRD5A1P1-201ENST00000442297 786 ntBASIC21.6■■□□□ 1.05
RNF44Q7L0R7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF44Q7L0R7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF44Q7L0R7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF44Q7L0R7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF44Q7L0R7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RNF44Q7L0R7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.59■■□□□ 1.05
RNF44Q7L0R7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
RNF44Q7L0R7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF44Q7L0R7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
RNF44Q7L0R7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
RNF44Q7L0R7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.58■■□□□ 1.05
RNF44Q7L0R7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.58■■□□□ 1.05
RNF44Q7L0R7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF44Q7L0R7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF44Q7L0R7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RNF44Q7L0R7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
RNF44Q7L0R7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.58■■□□□ 1.05
RNF44Q7L0R7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
RNF44Q7L0R7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RNF44Q7L0R7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RNF44Q7L0R7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
RNF44Q7L0R7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
RNF44Q7L0R7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RNF44Q7L0R7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF44Q7L0R7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF44Q7L0R7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.57■■□□□ 1.04
RNF44Q7L0R7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RNF44Q7L0R7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.57■■□□□ 1.04
RNF44Q7L0R7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF44Q7L0R7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF44Q7L0R7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF44Q7L0R7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF44Q7L0R7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF44Q7L0R7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF44Q7L0R7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.56■■□□□ 1.04
RNF44Q7L0R7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.56■■□□□ 1.04
RNF44Q7L0R7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF44Q7L0R7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF44Q7L0R7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.56■■□□□ 1.04
RNF44Q7L0R7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.56■■□□□ 1.04
RNF44Q7L0R7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF44Q7L0R7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.55■■□□□ 1.04
RNF44Q7L0R7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RNF44Q7L0R7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.55■■□□□ 1.04
RNF44Q7L0R7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF44Q7L0R7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RNF44Q7L0R7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RNF44Q7L0R7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF44Q7L0R7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RNF44Q7L0R7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF44Q7L0R7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF44Q7L0R7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.54■■□□□ 1.04
RNF44Q7L0R7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.54■■□□□ 1.04
RNF44Q7L0R7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF44Q7L0R7 AC093323.1-202ENST00000635031 2045 ntBASIC21.54■■□□□ 1.04
RNF44Q7L0R7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF44Q7L0R7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RNF44Q7L0R7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RNF44Q7L0R7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF44Q7L0R7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
RNF44Q7L0R7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF44Q7L0R7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms