Protein–RNA interactions for Protein: Q5VTD9

GFI1B, Zinc finger protein Gfi-1b, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1BQ5VTD9 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
GFI1BQ5VTD9 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GFI1BQ5VTD9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
GFI1BQ5VTD9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
GFI1BQ5VTD9 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GFI1BQ5VTD9 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
GFI1BQ5VTD9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GFI1BQ5VTD9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GFI1BQ5VTD9 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GFI1BQ5VTD9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.55■□□□□ 0.4
GFI1BQ5VTD9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
GFI1BQ5VTD9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
GFI1BQ5VTD9 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GFI1BQ5VTD9 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC17.55■□□□□ 0.4
GFI1BQ5VTD9 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.55■□□□□ 0.4
GFI1BQ5VTD9 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
GFI1BQ5VTD9 HES4-202ENST00000428771 1040 ntTSL 2 BASIC17.55■□□□□ 0.4
GFI1BQ5VTD9 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC17.55■□□□□ 0.4
GFI1BQ5VTD9 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GFI1BQ5VTD9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC17.55■□□□□ 0.4
GFI1BQ5VTD9 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GFI1BQ5VTD9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GFI1BQ5VTD9 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC17.55■□□□□ 0.4
GFI1BQ5VTD9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GFI1BQ5VTD9 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
GFI1BQ5VTD9 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
GFI1BQ5VTD9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GFI1BQ5VTD9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.55■□□□□ 0.4
GFI1BQ5VTD9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GFI1BQ5VTD9 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
GFI1BQ5VTD9 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GFI1BQ5VTD9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GFI1BQ5VTD9 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.54■□□□□ 0.4
GFI1BQ5VTD9 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GFI1BQ5VTD9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GFI1BQ5VTD9 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC17.54■□□□□ 0.4
GFI1BQ5VTD9 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GFI1BQ5VTD9 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
GFI1BQ5VTD9 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
GFI1BQ5VTD9 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC17.54■□□□□ 0.4
GFI1BQ5VTD9 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17.54■□□□□ 0.4
GFI1BQ5VTD9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GFI1BQ5VTD9 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GFI1BQ5VTD9 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GFI1BQ5VTD9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GFI1BQ5VTD9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
GFI1BQ5VTD9 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GFI1BQ5VTD9 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GFI1BQ5VTD9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GFI1BQ5VTD9 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GFI1BQ5VTD9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.53■□□□□ 0.4
GFI1BQ5VTD9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
GFI1BQ5VTD9 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
GFI1BQ5VTD9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
GFI1BQ5VTD9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
GFI1BQ5VTD9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
GFI1BQ5VTD9 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.52■□□□□ 0.4
GFI1BQ5VTD9 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GFI1BQ5VTD9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GFI1BQ5VTD9 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.52■□□□□ 0.4
GFI1BQ5VTD9 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.52■□□□□ 0.4
GFI1BQ5VTD9 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GFI1BQ5VTD9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
GFI1BQ5VTD9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
GFI1BQ5VTD9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
GFI1BQ5VTD9 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
GFI1BQ5VTD9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
GFI1BQ5VTD9 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
GFI1BQ5VTD9 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GFI1BQ5VTD9 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GFI1BQ5VTD9 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
GFI1BQ5VTD9 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
GFI1BQ5VTD9 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
GFI1BQ5VTD9 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
GFI1BQ5VTD9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.51■□□□□ 0.39
GFI1BQ5VTD9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
GFI1BQ5VTD9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GFI1BQ5VTD9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.51■□□□□ 0.39
GFI1BQ5VTD9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.5■□□□□ 0.39
GFI1BQ5VTD9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.5■□□□□ 0.39
GFI1BQ5VTD9 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GFI1BQ5VTD9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
GFI1BQ5VTD9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GFI1BQ5VTD9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GFI1BQ5VTD9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
GFI1BQ5VTD9 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
GFI1BQ5VTD9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GFI1BQ5VTD9 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
GFI1BQ5VTD9 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GFI1BQ5VTD9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
GFI1BQ5VTD9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GFI1BQ5VTD9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFI1BQ5VTD9 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
GFI1BQ5VTD9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC17.49■□□□□ 0.39
GFI1BQ5VTD9 SLC6A10P-202ENST00000431994 2058 ntBASIC17.49■□□□□ 0.39
GFI1BQ5VTD9 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GFI1BQ5VTD9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GFI1BQ5VTD9 GFER-205ENST00000569451 517 ntTSL 5 BASIC17.49■□□□□ 0.39
GFI1BQ5VTD9 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GFI1BQ5VTD9 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms