Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FREM1Q5H8C1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
FREM1Q5H8C1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.96■□□□□ 0.79
FREM1Q5H8C1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FREM1Q5H8C1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.95■□□□□ 0.78
FREM1Q5H8C1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FREM1Q5H8C1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FREM1Q5H8C1 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FREM1Q5H8C1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
FREM1Q5H8C1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.95■□□□□ 0.78
FREM1Q5H8C1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.95■□□□□ 0.78
FREM1Q5H8C1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FREM1Q5H8C1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FREM1Q5H8C1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FREM1Q5H8C1 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.94■□□□□ 0.78
FREM1Q5H8C1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.94■□□□□ 0.78
FREM1Q5H8C1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.94■□□□□ 0.78
FREM1Q5H8C1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FREM1Q5H8C1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
FREM1Q5H8C1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FREM1Q5H8C1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FREM1Q5H8C1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.94■□□□□ 0.78
FREM1Q5H8C1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.94■□□□□ 0.78
FREM1Q5H8C1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.94■□□□□ 0.78
FREM1Q5H8C1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
FREM1Q5H8C1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FREM1Q5H8C1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
FREM1Q5H8C1 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
FREM1Q5H8C1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.93■□□□□ 0.78
FREM1Q5H8C1 MIR638-201ENST00000385237 100 ntBASIC19.93■□□□□ 0.78
FREM1Q5H8C1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
FREM1Q5H8C1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
FREM1Q5H8C1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FREM1Q5H8C1 AC006455.2-201ENST00000429931 906 ntBASIC19.93■□□□□ 0.78
FREM1Q5H8C1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.93■□□□□ 0.78
FREM1Q5H8C1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FREM1Q5H8C1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
FREM1Q5H8C1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
FREM1Q5H8C1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
FREM1Q5H8C1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
FREM1Q5H8C1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.92■□□□□ 0.78
FREM1Q5H8C1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
FREM1Q5H8C1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
FREM1Q5H8C1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.92■□□□□ 0.78
FREM1Q5H8C1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.91■□□□□ 0.78
FREM1Q5H8C1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
FREM1Q5H8C1 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FREM1Q5H8C1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FREM1Q5H8C1 MIR935-201ENST00000401179 91 ntBASIC19.91■□□□□ 0.78
FREM1Q5H8C1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.91■□□□□ 0.78
FREM1Q5H8C1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FREM1Q5H8C1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.91■□□□□ 0.78
FREM1Q5H8C1 AC079630.1-202ENST00000618127 1840 ntBASIC19.91■□□□□ 0.78
FREM1Q5H8C1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
FREM1Q5H8C1 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.91■□□□□ 0.78
FREM1Q5H8C1 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FREM1Q5H8C1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FREM1Q5H8C1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FREM1Q5H8C1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FREM1Q5H8C1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FREM1Q5H8C1 AC106739.1-201ENST00000617035 715 ntBASIC19.91■□□□□ 0.78
FREM1Q5H8C1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FREM1Q5H8C1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.91■□□□□ 0.78
FREM1Q5H8C1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FREM1Q5H8C1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FREM1Q5H8C1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
FREM1Q5H8C1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.9■□□□□ 0.78
FREM1Q5H8C1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FREM1Q5H8C1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FREM1Q5H8C1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
FREM1Q5H8C1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
FREM1Q5H8C1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.9■□□□□ 0.78
FREM1Q5H8C1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FREM1Q5H8C1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FREM1Q5H8C1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FREM1Q5H8C1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FREM1Q5H8C1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FREM1Q5H8C1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FREM1Q5H8C1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FREM1Q5H8C1 AC024257.2-201ENST00000549699 147 ntBASIC19.89■□□□□ 0.77
FREM1Q5H8C1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.89■□□□□ 0.77
FREM1Q5H8C1 AC099791.2-201ENST00000605725 427 ntBASIC19.89■□□□□ 0.77
FREM1Q5H8C1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FREM1Q5H8C1 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FREM1Q5H8C1 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FREM1Q5H8C1 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FREM1Q5H8C1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.88■□□□□ 0.77
FREM1Q5H8C1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FREM1Q5H8C1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
FREM1Q5H8C1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FREM1Q5H8C1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FREM1Q5H8C1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.88■□□□□ 0.77
FREM1Q5H8C1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FREM1Q5H8C1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
FREM1Q5H8C1 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FREM1Q5H8C1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
FREM1Q5H8C1 SERBP1P1-201ENST00000396021 1160 ntBASIC19.87■□□□□ 0.77
FREM1Q5H8C1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FREM1Q5H8C1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FREM1Q5H8C1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms