Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
ATP6AP1LQ52LC2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6AP1LQ52LC2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP6AP1LQ52LC2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.78■■□□□ 1.08
ATP6AP1LQ52LC2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
ATP6AP1LQ52LC2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
ATP6AP1LQ52LC2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP6AP1LQ52LC2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP6AP1LQ52LC2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATP6AP1LQ52LC2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATP6AP1LQ52LC2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
ATP6AP1LQ52LC2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.77■■□□□ 1.08
ATP6AP1LQ52LC2 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATP6AP1LQ52LC2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATP6AP1LQ52LC2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
ATP6AP1LQ52LC2 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
ATP6AP1LQ52LC2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
ATP6AP1LQ52LC2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.07
ATP6AP1LQ52LC2 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
ATP6AP1LQ52LC2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.76■■□□□ 1.07
ATP6AP1LQ52LC2 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6AP1LQ52LC2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6AP1LQ52LC2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6AP1LQ52LC2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6AP1LQ52LC2 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.76■■□□□ 1.07
ATP6AP1LQ52LC2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6AP1LQ52LC2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.76■■□□□ 1.07
ATP6AP1LQ52LC2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6AP1LQ52LC2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
ATP6AP1LQ52LC2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.76■■□□□ 1.07
ATP6AP1LQ52LC2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
ATP6AP1LQ52LC2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6AP1LQ52LC2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6AP1LQ52LC2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6AP1LQ52LC2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6AP1LQ52LC2 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6AP1LQ52LC2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6AP1LQ52LC2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6AP1LQ52LC2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
ATP6AP1LQ52LC2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6AP1LQ52LC2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.75■■□□□ 1.07
ATP6AP1LQ52LC2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6AP1LQ52LC2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6AP1LQ52LC2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
ATP6AP1LQ52LC2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6AP1LQ52LC2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATP6AP1LQ52LC2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP6AP1LQ52LC2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATP6AP1LQ52LC2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATP6AP1LQ52LC2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP6AP1LQ52LC2 THA1P-201ENST00000590384 1145 ntBASIC21.74■■□□□ 1.07
ATP6AP1LQ52LC2 AC074183.2-201ENST00000623112 922 ntBASIC21.74■■□□□ 1.07
ATP6AP1LQ52LC2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATP6AP1LQ52LC2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.74■■□□□ 1.07
ATP6AP1LQ52LC2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
ATP6AP1LQ52LC2 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATP6AP1LQ52LC2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.74■■□□□ 1.07
ATP6AP1LQ52LC2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP6AP1LQ52LC2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATP6AP1LQ52LC2 KRT18P24-201ENST00000344739 1156 ntBASIC21.73■■□□□ 1.07
ATP6AP1LQ52LC2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
ATP6AP1LQ52LC2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATP6AP1LQ52LC2 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATP6AP1LQ52LC2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.73■■□□□ 1.07
ATP6AP1LQ52LC2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP6AP1LQ52LC2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATP6AP1LQ52LC2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.73■■□□□ 1.07
ATP6AP1LQ52LC2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATP6AP1LQ52LC2 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ATP6AP1LQ52LC2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP6AP1LQ52LC2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP6AP1LQ52LC2 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
ATP6AP1LQ52LC2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP6AP1LQ52LC2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
ATP6AP1LQ52LC2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ATP6AP1LQ52LC2 AC004987.1-201ENST00000428627 508 ntBASIC21.72■■□□□ 1.07
ATP6AP1LQ52LC2 ATP5G2P3-201ENST00000429083 425 ntBASIC21.72■■□□□ 1.07
ATP6AP1LQ52LC2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.72■■□□□ 1.07
ATP6AP1LQ52LC2 MIR4281-201ENST00000580852 62 ntBASIC21.72■■□□□ 1.07
ATP6AP1LQ52LC2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP6AP1LQ52LC2 AF131216.4-201ENST00000638924 1588 ntBASIC21.72■■□□□ 1.07
ATP6AP1LQ52LC2 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ATP6AP1LQ52LC2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP6AP1LQ52LC2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ATP6AP1LQ52LC2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP6AP1LQ52LC2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP6AP1LQ52LC2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP6AP1LQ52LC2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP6AP1LQ52LC2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP6AP1LQ52LC2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP6AP1LQ52LC2 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
ATP6AP1LQ52LC2 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP6AP1LQ52LC2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP6AP1LQ52LC2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
ATP6AP1LQ52LC2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP6AP1LQ52LC2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP6AP1LQ52LC2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.71■■□□□ 1.07
ATP6AP1LQ52LC2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.71■■□□□ 1.07
ATP6AP1LQ52LC2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
ATP6AP1LQ52LC2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms