Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
RFX4Q33E94 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
RFX4Q33E94 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
RFX4Q33E94 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.95■□□□□ 0.94
RFX4Q33E94 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RFX4Q33E94 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.95■□□□□ 0.94
RFX4Q33E94 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.95■□□□□ 0.94
RFX4Q33E94 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFX4Q33E94 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RFX4Q33E94 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFX4Q33E94 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.95■□□□□ 0.94
RFX4Q33E94 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFX4Q33E94 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFX4Q33E94 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RFX4Q33E94 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFX4Q33E94 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFX4Q33E94 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.94■□□□□ 0.94
RFX4Q33E94 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFX4Q33E94 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFX4Q33E94 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RFX4Q33E94 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFX4Q33E94 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RFX4Q33E94 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RFX4Q33E94 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFX4Q33E94 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.94■□□□□ 0.94
RFX4Q33E94 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RFX4Q33E94 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFX4Q33E94 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RFX4Q33E94 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFX4Q33E94 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.93■□□□□ 0.94
RFX4Q33E94 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RFX4Q33E94 RPS2P7-201ENST00000447334 885 ntBASIC20.93■□□□□ 0.94
RFX4Q33E94 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.93■□□□□ 0.94
RFX4Q33E94 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RFX4Q33E94 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.93■□□□□ 0.94
RFX4Q33E94 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFX4Q33E94 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFX4Q33E94 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFX4Q33E94 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFX4Q33E94 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFX4Q33E94 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.92■□□□□ 0.94
RFX4Q33E94 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.92■□□□□ 0.94
RFX4Q33E94 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.92■□□□□ 0.94
RFX4Q33E94 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFX4Q33E94 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.92■□□□□ 0.94
RFX4Q33E94 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFX4Q33E94 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.92■□□□□ 0.94
RFX4Q33E94 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFX4Q33E94 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RFX4Q33E94 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFX4Q33E94 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFX4Q33E94 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFX4Q33E94 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFX4Q33E94 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFX4Q33E94 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RFX4Q33E94 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFX4Q33E94 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
RFX4Q33E94 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFX4Q33E94 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.91■□□□□ 0.94
RFX4Q33E94 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RFX4Q33E94 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFX4Q33E94 AC018755.3-202ENST00000596210 929 ntBASIC20.91■□□□□ 0.94
RFX4Q33E94 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFX4Q33E94 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFX4Q33E94 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFX4Q33E94 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFX4Q33E94 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.9■□□□□ 0.94
RFX4Q33E94 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFX4Q33E94 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFX4Q33E94 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.9■□□□□ 0.94
RFX4Q33E94 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RFX4Q33E94 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFX4Q33E94 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
RFX4Q33E94 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFX4Q33E94 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RFX4Q33E94 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RFX4Q33E94 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RFX4Q33E94 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
RFX4Q33E94 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFX4Q33E94 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.89■□□□□ 0.93
RFX4Q33E94 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.89■□□□□ 0.93
RFX4Q33E94 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFX4Q33E94 AL592293.1-201ENST00000502889 1188 ntBASIC20.89■□□□□ 0.93
RFX4Q33E94 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.88■□□□□ 0.93
RFX4Q33E94 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFX4Q33E94 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RFX4Q33E94 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.88■□□□□ 0.93
RFX4Q33E94 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.88■□□□□ 0.93
RFX4Q33E94 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFX4Q33E94 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.88■□□□□ 0.93
RFX4Q33E94 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFX4Q33E94 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.88■□□□□ 0.93
RFX4Q33E94 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFX4Q33E94 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFX4Q33E94 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFX4Q33E94 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RFX4Q33E94 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFX4Q33E94 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RFX4Q33E94 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RFX4Q33E94 SPCS2P3-201ENST00000500401 656 ntBASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms