Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RAB5BP61020 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.76■□□□□ 0.43
RAB5BP61020 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAB5BP61020 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC17.76■□□□□ 0.43
RAB5BP61020 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC17.76■□□□□ 0.43
RAB5BP61020 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB5BP61020 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB5BP61020 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB5BP61020 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB5BP61020 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB5BP61020 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB5BP61020 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RAB5BP61020 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB5BP61020 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB5BP61020 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB5BP61020 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
RAB5BP61020 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RAB5BP61020 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB5BP61020 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB5BP61020 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB5BP61020 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB5BP61020 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB5BP61020 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
RAB5BP61020 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB5BP61020 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB5BP61020 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
RAB5BP61020 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB5BP61020 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB5BP61020 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB5BP61020 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB5BP61020 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB5BP61020 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB5BP61020 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB5BP61020 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RAB5BP61020 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB5BP61020 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB5BP61020 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB5BP61020 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB5BP61020 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB5BP61020 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB5BP61020 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB5BP61020 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB5BP61020 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB5BP61020 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RAB5BP61020 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB5BP61020 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB5BP61020 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.73■□□□□ 0.43
RAB5BP61020 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC17.73■□□□□ 0.43
RAB5BP61020 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RAB5BP61020 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB5BP61020 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RAB5BP61020 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB5BP61020 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RAB5BP61020 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB5BP61020 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB5BP61020 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB5BP61020 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB5BP61020 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC17.72■□□□□ 0.43
RAB5BP61020 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC17.72■□□□□ 0.43
RAB5BP61020 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB5BP61020 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RAB5BP61020 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB5BP61020 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.72■□□□□ 0.43
RAB5BP61020 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB5BP61020 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB5BP61020 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB5BP61020 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RAB5BP61020 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RAB5BP61020 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB5BP61020 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB5BP61020 DYNLL1-208ENST00000550178 581 ntBASIC17.71■□□□□ 0.43
RAB5BP61020 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RAB5BP61020 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB5BP61020 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RAB5BP61020 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB5BP61020 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RAB5BP61020 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB5BP61020 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
RAB5BP61020 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
RAB5BP61020 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB5BP61020 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB5BP61020 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB5BP61020 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RAB5BP61020 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB5BP61020 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RAB5BP61020 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB5BP61020 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB5BP61020 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RAB5BP61020 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.7■□□□□ 0.42
RAB5BP61020 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB5BP61020 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB5BP61020 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB5BP61020 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB5BP61020 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB5BP61020 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RAB5BP61020 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB5BP61020 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB5BP61020 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB5BP61020 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB5BP61020 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms