Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
FOXG1P55316 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.88■□□□□ 0.77
FOXG1P55316 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXG1P55316 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXG1P55316 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.88■□□□□ 0.77
FOXG1P55316 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FOXG1P55316 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.88■□□□□ 0.77
FOXG1P55316 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FOXG1P55316 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.88■□□□□ 0.77
FOXG1P55316 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.88■□□□□ 0.77
FOXG1P55316 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXG1P55316 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXG1P55316 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
FOXG1P55316 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXG1P55316 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXG1P55316 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
FOXG1P55316 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
FOXG1P55316 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXG1P55316 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXG1P55316 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXG1P55316 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXG1P55316 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXG1P55316 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.86■□□□□ 0.77
FOXG1P55316 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXG1P55316 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXG1P55316 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
FOXG1P55316 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXG1P55316 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXG1P55316 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
FOXG1P55316 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.86■□□□□ 0.77
FOXG1P55316 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
FOXG1P55316 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.86■□□□□ 0.77
FOXG1P55316 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXG1P55316 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.86■□□□□ 0.77
FOXG1P55316 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXG1P55316 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXG1P55316 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXG1P55316 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.85■□□□□ 0.77
FOXG1P55316 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXG1P55316 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
FOXG1P55316 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.85■□□□□ 0.77
FOXG1P55316 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.85■□□□□ 0.77
FOXG1P55316 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXG1P55316 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXG1P55316 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXG1P55316 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FOXG1P55316 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.84■□□□□ 0.77
FOXG1P55316 C17orf82-201ENST00000623772 1530 ntBASIC19.84■□□□□ 0.77
FOXG1P55316 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXG1P55316 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FOXG1P55316 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXG1P55316 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXG1P55316 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXG1P55316 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
FOXG1P55316 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
FOXG1P55316 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
FOXG1P55316 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
FOXG1P55316 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
FOXG1P55316 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
FOXG1P55316 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
FOXG1P55316 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
FOXG1P55316 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
FOXG1P55316 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
FOXG1P55316 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
FOXG1P55316 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.82■□□□□ 0.76
FOXG1P55316 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
FOXG1P55316 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXG1P55316 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXG1P55316 SRD5A1P1-201ENST00000442297 786 ntBASIC19.82■□□□□ 0.76
FOXG1P55316 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FOXG1P55316 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXG1P55316 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXG1P55316 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXG1P55316 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXG1P55316 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXG1P55316 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXG1P55316 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXG1P55316 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXG1P55316 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXG1P55316 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.81■□□□□ 0.76
FOXG1P55316 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.81■□□□□ 0.76
FOXG1P55316 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.81■□□□□ 0.76
FOXG1P55316 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FOXG1P55316 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXG1P55316 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.81■□□□□ 0.76
FOXG1P55316 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXG1P55316 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
FOXG1P55316 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXG1P55316 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
FOXG1P55316 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXG1P55316 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXG1P55316 AC099791.2-201ENST00000605725 427 ntBASIC19.8■□□□□ 0.76
FOXG1P55316 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
FOXG1P55316 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.8■□□□□ 0.76
FOXG1P55316 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
FOXG1P55316 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.8■□□□□ 0.76
FOXG1P55316 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
FOXG1P55316 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXG1P55316 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.79■□□□□ 0.76
FOXG1P55316 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms