Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.11■□□□□ 0.81
SLC25A1P53007 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.11■□□□□ 0.81
SLC25A1P53007 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.11■□□□□ 0.81
SLC25A1P53007 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.11■□□□□ 0.81
SLC25A1P53007 C1orf229-201ENST00000623686 2258 ntBASIC20.11■□□□□ 0.81
SLC25A1P53007 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.11■□□□□ 0.81
SLC25A1P53007 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC25A1P53007 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.1■□□□□ 0.81
SLC25A1P53007 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC25A1P53007 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.1■□□□□ 0.81
SLC25A1P53007 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.1■□□□□ 0.81
SLC25A1P53007 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.1■□□□□ 0.81
SLC25A1P53007 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
SLC25A1P53007 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.1■□□□□ 0.81
SLC25A1P53007 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC25A1P53007 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC25A1P53007 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.09■□□□□ 0.81
SLC25A1P53007 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC25A1P53007 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SLC25A1P53007 AC010980.1-201ENST00000587192 1142 ntBASIC20.09■□□□□ 0.81
SLC25A1P53007 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.09■□□□□ 0.81
SLC25A1P53007 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC25A1P53007 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.09■□□□□ 0.81
SLC25A1P53007 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SLC25A1P53007 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC25A1P53007 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.09■□□□□ 0.81
SLC25A1P53007 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SLC25A1P53007 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC25A1P53007 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC25A1P53007 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
SLC25A1P53007 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC25A1P53007 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC25A1P53007 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC25A1P53007 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.08■□□□□ 0.8
SLC25A1P53007 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SLC25A1P53007 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SLC25A1P53007 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.07■□□□□ 0.8
SLC25A1P53007 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC25A1P53007 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC25A1P53007 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC25A1P53007 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC25A1P53007 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SLC25A1P53007 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
SLC25A1P53007 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC25A1P53007 AC079630.1-202ENST00000618127 1840 ntBASIC20.06■□□□□ 0.8
SLC25A1P53007 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC25A1P53007 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC25A1P53007 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SLC25A1P53007 MIR4508-201ENST00000584178 70 ntBASIC20.06■□□□□ 0.8
SLC25A1P53007 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC25A1P53007 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC25A1P53007 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC25A1P53007 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC25A1P53007 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.05■□□□□ 0.8
SLC25A1P53007 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC25A1P53007 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC25A1P53007 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC25A1P53007 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.05■□□□□ 0.8
SLC25A1P53007 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.05■□□□□ 0.8
SLC25A1P53007 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC25A1P53007 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SLC25A1P53007 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC25A1P53007 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SLC25A1P53007 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC25A1P53007 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SLC25A1P53007 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SLC25A1P53007 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC25A1P53007 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SLC25A1P53007 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.04■□□□□ 0.8
SLC25A1P53007 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC25A1P53007 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
SLC25A1P53007 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC25A1P53007 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC25A1P53007 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC25A1P53007 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC25A1P53007 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SLC25A1P53007 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC25A1P53007 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.03■□□□□ 0.8
SLC25A1P53007 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC25A1P53007 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC25A1P53007 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC25A1P53007 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC25A1P53007 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SLC25A1P53007 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC25A1P53007 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC25A1P53007 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC25A1P53007 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC25A1P53007 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.02■□□□□ 0.8
SLC25A1P53007 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC25A1P53007 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC25A1P53007 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SLC25A1P53007 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SLC25A1P53007 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC25A1P53007 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC25A1P53007 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.02■□□□□ 0.8
SLC25A1P53007 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SLC25A1P53007 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC25A1P53007 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC25A1P53007 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC25A1P53007 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms