Protein–RNA interactions for Protein: P04818

TYMS, Thymidylate synthase, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TYMSP04818 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TYMSP04818 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TYMSP04818 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TYMSP04818 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TYMSP04818 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TYMSP04818 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TYMSP04818 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TYMSP04818 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TYMSP04818 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TYMSP04818 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TYMSP04818 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TYMSP04818 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
TYMSP04818 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.34■□□□□ 0.37
TYMSP04818 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.34■□□□□ 0.37
TYMSP04818 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TYMSP04818 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TYMSP04818 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
TYMSP04818 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
TYMSP04818 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TYMSP04818 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TYMSP04818 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC17.33■□□□□ 0.37
TYMSP04818 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.33■□□□□ 0.37
TYMSP04818 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC17.33■□□□□ 0.37
TYMSP04818 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TYMSP04818 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
TYMSP04818 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TYMSP04818 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TYMSP04818 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TYMSP04818 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TYMSP04818 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TYMSP04818 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TYMSP04818 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TYMSP04818 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.32■□□□□ 0.36
TYMSP04818 SMPD5-203ENST00000639008 1464 ntBASIC17.32■□□□□ 0.36
TYMSP04818 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.32■□□□□ 0.36
TYMSP04818 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TYMSP04818 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.32■□□□□ 0.36
TYMSP04818 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.32■□□□□ 0.36
TYMSP04818 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TYMSP04818 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC17.32■□□□□ 0.36
TYMSP04818 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TYMSP04818 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TYMSP04818 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TYMSP04818 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TYMSP04818 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TYMSP04818 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TYMSP04818 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.31■□□□□ 0.36
TYMSP04818 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TYMSP04818 TPT1-202ENST00000379055 948 ntTSL 2 BASIC17.31■□□□□ 0.36
TYMSP04818 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TYMSP04818 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TYMSP04818 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TYMSP04818 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TYMSP04818 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TYMSP04818 HLA-L-211ENST00000482052 1765 ntBASIC17.3■□□□□ 0.36
TYMSP04818 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TYMSP04818 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TYMSP04818 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TYMSP04818 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TYMSP04818 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TYMSP04818 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.3■□□□□ 0.36
TYMSP04818 MIR7108-201ENST00000614319 87 ntBASIC17.3■□□□□ 0.36
TYMSP04818 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TYMSP04818 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TYMSP04818 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TYMSP04818 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TYMSP04818 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TYMSP04818 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TYMSP04818 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TYMSP04818 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TYMSP04818 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TYMSP04818 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TYMSP04818 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TYMSP04818 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TYMSP04818 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TYMSP04818 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TYMSP04818 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TYMSP04818 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TYMSP04818 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TYMSP04818 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TYMSP04818 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.29■□□□□ 0.36
TYMSP04818 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC17.29■□□□□ 0.36
TYMSP04818 AC092296.2-201ENST00000589470 999 ntBASIC17.29■□□□□ 0.36
TYMSP04818 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TYMSP04818 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TYMSP04818 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TYMSP04818 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TYMSP04818 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.28■□□□□ 0.36
TYMSP04818 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TYMSP04818 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.28■□□□□ 0.36
TYMSP04818 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
TYMSP04818 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TYMSP04818 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TYMSP04818 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TYMSP04818 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TYMSP04818 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
TYMSP04818 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TYMSP04818 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TYMSP04818 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TYMSP04818 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms