Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SIX6O95475 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SIX6O95475 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SIX6O95475 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.88■□□□□ 0.61
SIX6O95475 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.88■□□□□ 0.61
SIX6O95475 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.88■□□□□ 0.61
SIX6O95475 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIX6O95475 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.88■□□□□ 0.61
SIX6O95475 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIX6O95475 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.88■□□□□ 0.61
SIX6O95475 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIX6O95475 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SIX6O95475 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.88■□□□□ 0.61
SIX6O95475 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIX6O95475 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIX6O95475 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIX6O95475 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SIX6O95475 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SIX6O95475 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SIX6O95475 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SIX6O95475 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.87■□□□□ 0.61
SIX6O95475 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SIX6O95475 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
SIX6O95475 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SIX6O95475 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIX6O95475 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SIX6O95475 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIX6O95475 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.86■□□□□ 0.61
SIX6O95475 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SIX6O95475 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIX6O95475 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIX6O95475 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SIX6O95475 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.86■□□□□ 0.61
SIX6O95475 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIX6O95475 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIX6O95475 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.86■□□□□ 0.61
SIX6O95475 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIX6O95475 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.86■□□□□ 0.61
SIX6O95475 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIX6O95475 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SIX6O95475 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SIX6O95475 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIX6O95475 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SIX6O95475 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIX6O95475 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIX6O95475 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.85■□□□□ 0.61
SIX6O95475 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIX6O95475 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SIX6O95475 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIX6O95475 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIX6O95475 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.84■□□□□ 0.61
SIX6O95475 FBXW4P1-201ENST00000426721 2239 ntBASIC18.84■□□□□ 0.61
SIX6O95475 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.84■□□□□ 0.61
SIX6O95475 AC087741.3-201ENST00000624270 1347 ntBASIC18.84■□□□□ 0.61
SIX6O95475 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIX6O95475 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.84■□□□□ 0.61
SIX6O95475 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
SIX6O95475 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.84■□□□□ 0.61
SIX6O95475 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SIX6O95475 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIX6O95475 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
SIX6O95475 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIX6O95475 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SIX6O95475 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SIX6O95475 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.83■□□□□ 0.61
SIX6O95475 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.83■□□□□ 0.61
SIX6O95475 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
SIX6O95475 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.83■□□□□ 0.61
SIX6O95475 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SIX6O95475 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SIX6O95475 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIX6O95475 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SIX6O95475 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIX6O95475 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SIX6O95475 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SIX6O95475 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIX6O95475 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.83■□□□□ 0.6
SIX6O95475 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.83■□□□□ 0.6
SIX6O95475 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIX6O95475 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIX6O95475 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIX6O95475 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SIX6O95475 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIX6O95475 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.82■□□□□ 0.6
SIX6O95475 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SIX6O95475 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIX6O95475 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SIX6O95475 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIX6O95475 C11orf96-202ENST00000528572 1834 ntBASIC18.81■□□□□ 0.6
SIX6O95475 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.81■□□□□ 0.6
SIX6O95475 HLA-V-202ENST00000446817 847 ntBASIC18.81■□□□□ 0.6
SIX6O95475 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.81■□□□□ 0.6
SIX6O95475 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIX6O95475 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIX6O95475 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIX6O95475 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SIX6O95475 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.81■□□□□ 0.6
SIX6O95475 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SIX6O95475 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SIX6O95475 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms