Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDRT1O95170 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDRT1O95170 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.09■□□□□ 0.81
CDRT1O95170 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDRT1O95170 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDRT1O95170 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.09■□□□□ 0.81
CDRT1O95170 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDRT1O95170 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDRT1O95170 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CDRT1O95170 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CDRT1O95170 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.09■□□□□ 0.81
CDRT1O95170 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDRT1O95170 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDRT1O95170 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CDRT1O95170 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.08■□□□□ 0.81
CDRT1O95170 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDRT1O95170 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
CDRT1O95170 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDRT1O95170 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.08■□□□□ 0.8
CDRT1O95170 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.08■□□□□ 0.8
CDRT1O95170 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CDRT1O95170 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDRT1O95170 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.08■□□□□ 0.8
CDRT1O95170 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.07■□□□□ 0.8
CDRT1O95170 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.07■□□□□ 0.8
CDRT1O95170 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDRT1O95170 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
CDRT1O95170 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDRT1O95170 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
CDRT1O95170 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
CDRT1O95170 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDRT1O95170 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDRT1O95170 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDRT1O95170 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDRT1O95170 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDRT1O95170 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDRT1O95170 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CDRT1O95170 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
CDRT1O95170 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CDRT1O95170 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDRT1O95170 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDRT1O95170 AC242852.2-201ENST00000615738 1807 ntBASIC20.06■□□□□ 0.8
CDRT1O95170 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDRT1O95170 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDRT1O95170 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDRT1O95170 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.05■□□□□ 0.8
CDRT1O95170 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDRT1O95170 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDRT1O95170 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.05■□□□□ 0.8
CDRT1O95170 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDRT1O95170 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDRT1O95170 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDRT1O95170 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDRT1O95170 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.05■□□□□ 0.8
CDRT1O95170 AC007029.1-201ENST00000604183 313 ntBASIC20.05■□□□□ 0.8
CDRT1O95170 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDRT1O95170 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDRT1O95170 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDRT1O95170 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDRT1O95170 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.04■□□□□ 0.8
CDRT1O95170 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CDRT1O95170 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDRT1O95170 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CDRT1O95170 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
CDRT1O95170 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDRT1O95170 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.04■□□□□ 0.8
CDRT1O95170 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.04■□□□□ 0.8
CDRT1O95170 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDRT1O95170 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDRT1O95170 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDRT1O95170 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.03■□□□□ 0.8
CDRT1O95170 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
CDRT1O95170 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDRT1O95170 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.03■□□□□ 0.8
CDRT1O95170 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.03■□□□□ 0.8
CDRT1O95170 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDRT1O95170 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDRT1O95170 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDRT1O95170 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDRT1O95170 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDRT1O95170 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDRT1O95170 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.02■□□□□ 0.8
CDRT1O95170 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.02■□□□□ 0.8
CDRT1O95170 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CDRT1O95170 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CDRT1O95170 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDRT1O95170 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDRT1O95170 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDRT1O95170 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.02■□□□□ 0.8
CDRT1O95170 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
CDRT1O95170 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDRT1O95170 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDRT1O95170 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.01■□□□□ 0.79
CDRT1O95170 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDRT1O95170 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDRT1O95170 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDRT1O95170 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.01■□□□□ 0.79
CDRT1O95170 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDRT1O95170 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDRT1O95170 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms