Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LCMT2O60294 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
LCMT2O60294 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.65■■□□□ 1.06
LCMT2O60294 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.65■■□□□ 1.06
LCMT2O60294 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LCMT2O60294 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.65■■□□□ 1.06
LCMT2O60294 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.65■■□□□ 1.06
LCMT2O60294 MIR3621-201ENST00000580529 85 ntBASIC21.65■■□□□ 1.06
LCMT2O60294 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.65■■□□□ 1.06
LCMT2O60294 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.65■■□□□ 1.06
LCMT2O60294 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
LCMT2O60294 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
LCMT2O60294 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
LCMT2O60294 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
LCMT2O60294 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LCMT2O60294 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LCMT2O60294 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.64■■□□□ 1.05
LCMT2O60294 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.64■■□□□ 1.05
LCMT2O60294 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
LCMT2O60294 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LCMT2O60294 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
LCMT2O60294 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
LCMT2O60294 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.63■■□□□ 1.05
LCMT2O60294 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.63■■□□□ 1.05
LCMT2O60294 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
LCMT2O60294 AL356740.2-201ENST00000601559 647 ntBASIC21.63■■□□□ 1.05
LCMT2O60294 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LCMT2O60294 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.62■■□□□ 1.05
LCMT2O60294 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LCMT2O60294 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LCMT2O60294 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
LCMT2O60294 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LCMT2O60294 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LCMT2O60294 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
LCMT2O60294 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.62■■□□□ 1.05
LCMT2O60294 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
LCMT2O60294 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.62■■□□□ 1.05
LCMT2O60294 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LCMT2O60294 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.62■■□□□ 1.05
LCMT2O60294 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.62■■□□□ 1.05
LCMT2O60294 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LCMT2O60294 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LCMT2O60294 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LCMT2O60294 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LCMT2O60294 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LCMT2O60294 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LCMT2O60294 AC009102.2-201ENST00000606772 1639 ntBASIC21.61■■□□□ 1.05
LCMT2O60294 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LCMT2O60294 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LCMT2O60294 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.6■■□□□ 1.05
LCMT2O60294 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LCMT2O60294 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LCMT2O60294 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
LCMT2O60294 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LCMT2O60294 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LCMT2O60294 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LCMT2O60294 AC131212.1-201ENST00000613771 668 ntBASIC21.6■■□□□ 1.05
LCMT2O60294 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LCMT2O60294 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.6■■□□□ 1.05
LCMT2O60294 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.6■■□□□ 1.05
LCMT2O60294 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.6■■□□□ 1.05
LCMT2O60294 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
LCMT2O60294 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LCMT2O60294 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LCMT2O60294 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LCMT2O60294 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.59■■□□□ 1.05
LCMT2O60294 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.59■■□□□ 1.05
LCMT2O60294 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
LCMT2O60294 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.59■■□□□ 1.05
LCMT2O60294 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LCMT2O60294 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LCMT2O60294 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.58■■□□□ 1.05
LCMT2O60294 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
LCMT2O60294 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
LCMT2O60294 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LCMT2O60294 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
LCMT2O60294 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LCMT2O60294 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LCMT2O60294 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LCMT2O60294 ANOS2P-203ENST00000472227 1816 ntBASIC21.58■■□□□ 1.05
LCMT2O60294 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.58■■□□□ 1.05
LCMT2O60294 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.58■■□□□ 1.05
LCMT2O60294 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LCMT2O60294 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LCMT2O60294 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.58■■□□□ 1.05
LCMT2O60294 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LCMT2O60294 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
LCMT2O60294 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
LCMT2O60294 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.58■■□□□ 1.04
LCMT2O60294 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.58■■□□□ 1.04
LCMT2O60294 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.57■■□□□ 1.04
LCMT2O60294 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
LCMT2O60294 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LCMT2O60294 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LCMT2O60294 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LCMT2O60294 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LCMT2O60294 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.57■■□□□ 1.04
LCMT2O60294 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.57■■□□□ 1.04
LCMT2O60294 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LCMT2O60294 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms