Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
ATP2A1O14983 MPST-208ENST00000628507 698 ntTSL 5 BASIC26.01■■□□□ 1.75
ATP2A1O14983 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ATP2A1O14983 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26■■□□□ 1.75
ATP2A1O14983 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26■■□□□ 1.75
ATP2A1O14983 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ATP2A1O14983 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ATP2A1O14983 AC141586.4-201ENST00000624558 1573 ntBASIC26■■□□□ 1.75
ATP2A1O14983 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
ATP2A1O14983 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ATP2A1O14983 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ATP2A1O14983 AC233992.3-201ENST00000607491 485 ntBASIC26■■□□□ 1.75
ATP2A1O14983 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
ATP2A1O14983 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
ATP2A1O14983 SNX3-202ENST00000349379 890 ntTSL 2 BASIC25.99■■□□□ 1.75
ATP2A1O14983 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
ATP2A1O14983 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
ATP2A1O14983 MIR6821-201ENST00000617625 74 ntBASIC25.99■■□□□ 1.75
ATP2A1O14983 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
ATP2A1O14983 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.99■■□□□ 1.75
ATP2A1O14983 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC25.99■■□□□ 1.75
ATP2A1O14983 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
ATP2A1O14983 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.98■■□□□ 1.75
ATP2A1O14983 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
ATP2A1O14983 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
ATP2A1O14983 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC25.98■■□□□ 1.75
ATP2A1O14983 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
ATP2A1O14983 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
ATP2A1O14983 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.98■■□□□ 1.75
ATP2A1O14983 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
ATP2A1O14983 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
ATP2A1O14983 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC25.97■■□□□ 1.75
ATP2A1O14983 MIR5787-201ENST00000611784 55 ntBASIC25.97■■□□□ 1.75
ATP2A1O14983 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC25.97■■□□□ 1.75
ATP2A1O14983 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC25.96■■□□□ 1.75
ATP2A1O14983 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
ATP2A1O14983 pRNA.6-201ENST00000610482 90 ntBASIC25.96■■□□□ 1.75
ATP2A1O14983 pRNA.5-201ENST00000612139 90 ntBASIC25.96■■□□□ 1.75
ATP2A1O14983 pRNA.11-201ENST00000618423 90 ntBASIC25.96■■□□□ 1.75
ATP2A1O14983 pRNA.13-201ENST00000619112 90 ntBASIC25.96■■□□□ 1.75
ATP2A1O14983 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
ATP2A1O14983 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
ATP2A1O14983 AC142381.3-201ENST00000568208 1670 ntBASIC25.96■■□□□ 1.75
ATP2A1O14983 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.96■■□□□ 1.75
ATP2A1O14983 IRS3P-201ENST00000223076 1006 ntBASIC25.95■■□□□ 1.74
ATP2A1O14983 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
ATP2A1O14983 AC097381.1-201ENST00000429019 1296 ntBASIC25.95■■□□□ 1.74
ATP2A1O14983 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC25.95■■□□□ 1.74
ATP2A1O14983 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.95■■□□□ 1.74
ATP2A1O14983 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
ATP2A1O14983 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
ATP2A1O14983 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
ATP2A1O14983 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
ATP2A1O14983 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
ATP2A1O14983 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC25.94■■□□□ 1.74
ATP2A1O14983 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
ATP2A1O14983 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.94■■□□□ 1.74
ATP2A1O14983 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
ATP2A1O14983 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
ATP2A1O14983 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
ATP2A1O14983 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC25.93■■□□□ 1.74
ATP2A1O14983 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC25.93■■□□□ 1.74
ATP2A1O14983 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.93■■□□□ 1.74
ATP2A1O14983 AC135731.1-201ENST00000569415 2548 ntBASIC25.93■■□□□ 1.74
ATP2A1O14983 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.93■■□□□ 1.74
ATP2A1O14983 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
ATP2A1O14983 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
ATP2A1O14983 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ATP2A1O14983 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ATP2A1O14983 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
ATP2A1O14983 RHOF-204ENST00000537265 699 ntTSL 2 BASIC25.92■■□□□ 1.74
ATP2A1O14983 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC25.92■■□□□ 1.74
ATP2A1O14983 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
ATP2A1O14983 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC25.92■■□□□ 1.74
ATP2A1O14983 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
ATP2A1O14983 ASB1-202ENST00000409297 878 ntTSL 5 BASIC25.91■■□□□ 1.74
ATP2A1O14983 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
ATP2A1O14983 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.91■■□□□ 1.74
ATP2A1O14983 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
ATP2A1O14983 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC25.91■■□□□ 1.74
ATP2A1O14983 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.91■■□□□ 1.74
ATP2A1O14983 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
ATP2A1O14983 AC138932.3-201ENST00000567634 1902 ntBASIC25.9■■□□□ 1.74
ATP2A1O14983 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
ATP2A1O14983 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
ATP2A1O14983 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
ATP2A1O14983 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
ATP2A1O14983 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
ATP2A1O14983 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.9■■□□□ 1.74
ATP2A1O14983 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
ATP2A1O14983 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
ATP2A1O14983 MED17-227ENST00000640521 2047 ntTSL 5 BASIC25.89■■□□□ 1.74
ATP2A1O14983 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC25.89■■□□□ 1.74
ATP2A1O14983 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
ATP2A1O14983 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC25.89■■□□□ 1.74
ATP2A1O14983 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
ATP2A1O14983 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
ATP2A1O14983 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.89■■□□□ 1.73
ATP2A1O14983 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC25.88■■□□□ 1.73
ATP2A1O14983 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC25.88■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms