Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPB4C9JG80 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPB4C9JG80 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPB4C9JG80 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPIPB4C9JG80 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
NPIPB4C9JG80 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NPIPB4C9JG80 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NPIPB4C9JG80 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPIPB4C9JG80 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPIPB4C9JG80 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.08■□□□□ 0.81
NPIPB4C9JG80 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPIPB4C9JG80 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
NPIPB4C9JG80 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPIPB4C9JG80 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.08■□□□□ 0.81
NPIPB4C9JG80 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.08■□□□□ 0.81
NPIPB4C9JG80 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NPIPB4C9JG80 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NPIPB4C9JG80 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
NPIPB4C9JG80 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NPIPB4C9JG80 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NPIPB4C9JG80 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPIPB4C9JG80 AC079630.1-202ENST00000618127 1840 ntBASIC20.07■□□□□ 0.8
NPIPB4C9JG80 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPIPB4C9JG80 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NPIPB4C9JG80 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NPIPB4C9JG80 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NPIPB4C9JG80 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPIPB4C9JG80 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
NPIPB4C9JG80 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.07■□□□□ 0.8
NPIPB4C9JG80 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
NPIPB4C9JG80 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
NPIPB4C9JG80 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
NPIPB4C9JG80 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPIPB4C9JG80 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.06■□□□□ 0.8
NPIPB4C9JG80 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.06■□□□□ 0.8
NPIPB4C9JG80 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
NPIPB4C9JG80 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NPIPB4C9JG80 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
NPIPB4C9JG80 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
NPIPB4C9JG80 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPIPB4C9JG80 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
NPIPB4C9JG80 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NPIPB4C9JG80 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
NPIPB4C9JG80 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NPIPB4C9JG80 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPIPB4C9JG80 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.05■□□□□ 0.8
NPIPB4C9JG80 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NPIPB4C9JG80 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NPIPB4C9JG80 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPIPB4C9JG80 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NPIPB4C9JG80 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPIPB4C9JG80 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.05■□□□□ 0.8
NPIPB4C9JG80 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NPIPB4C9JG80 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
NPIPB4C9JG80 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.05■□□□□ 0.8
NPIPB4C9JG80 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
NPIPB4C9JG80 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.04■□□□□ 0.8
NPIPB4C9JG80 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.04■□□□□ 0.8
NPIPB4C9JG80 AC009299.2-201ENST00000482477 511 ntBASIC20.04■□□□□ 0.8
NPIPB4C9JG80 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.04■□□□□ 0.8
NPIPB4C9JG80 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.04■□□□□ 0.8
NPIPB4C9JG80 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.03■□□□□ 0.8
NPIPB4C9JG80 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPIPB4C9JG80 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.03■□□□□ 0.8
NPIPB4C9JG80 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPIPB4C9JG80 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
NPIPB4C9JG80 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPIPB4C9JG80 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.03■□□□□ 0.8
NPIPB4C9JG80 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPIPB4C9JG80 MIR4787-201ENST00000607364 84 ntBASIC20.03■□□□□ 0.8
NPIPB4C9JG80 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPIPB4C9JG80 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
NPIPB4C9JG80 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPIPB4C9JG80 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.03■□□□□ 0.8
NPIPB4C9JG80 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPIPB4C9JG80 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
NPIPB4C9JG80 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.02■□□□□ 0.8
NPIPB4C9JG80 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPIPB4C9JG80 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPIPB4C9JG80 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPIPB4C9JG80 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NPIPB4C9JG80 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NPIPB4C9JG80 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPIPB4C9JG80 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
NPIPB4C9JG80 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.02■□□□□ 0.8
NPIPB4C9JG80 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPIPB4C9JG80 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPIPB4C9JG80 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
NPIPB4C9JG80 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPIPB4C9JG80 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.02■□□□□ 0.8
NPIPB4C9JG80 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NPIPB4C9JG80 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.02■□□□□ 0.8
NPIPB4C9JG80 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.02■□□□□ 0.79
NPIPB4C9JG80 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
NPIPB4C9JG80 AC144652.1-201ENST00000609974 1624 ntBASIC20.02■□□□□ 0.79
NPIPB4C9JG80 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
NPIPB4C9JG80 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.01■□□□□ 0.79
NPIPB4C9JG80 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPIPB4C9JG80 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NPIPB4C9JG80 MTDHP2-201ENST00000601468 714 ntBASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms