Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV10-1A0A0K0K1A3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TRBV10-1A0A0K0K1A3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC15.93■□□□□ 0.14
TRBV10-1A0A0K0K1A3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC15.93■□□□□ 0.14
TRBV10-1A0A0K0K1A3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC15.93■□□□□ 0.14
TRBV10-1A0A0K0K1A3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV10-1A0A0K0K1A3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC15.92■□□□□ 0.14
TRBV10-1A0A0K0K1A3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV10-1A0A0K0K1A3 MIR4508-201ENST00000584178 70 ntBASIC15.92■□□□□ 0.14
TRBV10-1A0A0K0K1A3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
TRBV10-1A0A0K0K1A3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV10-1A0A0K0K1A3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC15.92■□□□□ 0.14
TRBV10-1A0A0K0K1A3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV10-1A0A0K0K1A3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
TRBV10-1A0A0K0K1A3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV10-1A0A0K0K1A3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV10-1A0A0K0K1A3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC15.92■□□□□ 0.14
TRBV10-1A0A0K0K1A3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV10-1A0A0K0K1A3 C9orf163-202ENST00000624034 2573 ntBASIC15.91■□□□□ 0.14
TRBV10-1A0A0K0K1A3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC15.91■□□□□ 0.14
TRBV10-1A0A0K0K1A3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV10-1A0A0K0K1A3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV10-1A0A0K0K1A3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV10-1A0A0K0K1A3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV10-1A0A0K0K1A3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC15.91■□□□□ 0.14
TRBV10-1A0A0K0K1A3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC15.91■□□□□ 0.14
TRBV10-1A0A0K0K1A3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC15.91■□□□□ 0.14
TRBV10-1A0A0K0K1A3 AC010980.1-201ENST00000587192 1142 ntBASIC15.91■□□□□ 0.14
TRBV10-1A0A0K0K1A3 PVT1_1.1-201ENST00000615125 194 ntBASIC15.91■□□□□ 0.14
TRBV10-1A0A0K0K1A3 H19-210ENST00000439725 1929 ntTSL 2 BASIC15.91■□□□□ 0.14
TRBV10-1A0A0K0K1A3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV10-1A0A0K0K1A3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV10-1A0A0K0K1A3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV10-1A0A0K0K1A3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
TRBV10-1A0A0K0K1A3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRBV10-1A0A0K0K1A3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV10-1A0A0K0K1A3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV10-1A0A0K0K1A3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV10-1A0A0K0K1A3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV10-1A0A0K0K1A3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV10-1A0A0K0K1A3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV10-1A0A0K0K1A3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV10-1A0A0K0K1A3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TRBV10-1A0A0K0K1A3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC15.9■□□□□ 0.14
TRBV10-1A0A0K0K1A3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TRBV10-1A0A0K0K1A3 AC012354.3-201ENST00000623734 483 ntBASIC15.9■□□□□ 0.14
TRBV10-1A0A0K0K1A3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV10-1A0A0K0K1A3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV10-1A0A0K0K1A3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV10-1A0A0K0K1A3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC15.9■□□□□ 0.14
TRBV10-1A0A0K0K1A3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV10-1A0A0K0K1A3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV10-1A0A0K0K1A3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV10-1A0A0K0K1A3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRBV10-1A0A0K0K1A3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV10-1A0A0K0K1A3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC15.89■□□□□ 0.13
TRBV10-1A0A0K0K1A3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV10-1A0A0K0K1A3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV10-1A0A0K0K1A3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC15.89■□□□□ 0.13
TRBV10-1A0A0K0K1A3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV10-1A0A0K0K1A3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV10-1A0A0K0K1A3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TRBV10-1A0A0K0K1A3 AL117328.2-201ENST00000624617 1940 ntBASIC15.89■□□□□ 0.13
TRBV10-1A0A0K0K1A3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV10-1A0A0K0K1A3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC15.89■□□□□ 0.13
TRBV10-1A0A0K0K1A3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV10-1A0A0K0K1A3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV10-1A0A0K0K1A3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV10-1A0A0K0K1A3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC15.88■□□□□ 0.13
TRBV10-1A0A0K0K1A3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV10-1A0A0K0K1A3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TRBV10-1A0A0K0K1A3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV10-1A0A0K0K1A3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV10-1A0A0K0K1A3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV10-1A0A0K0K1A3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV10-1A0A0K0K1A3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC15.88■□□□□ 0.13
TRBV10-1A0A0K0K1A3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
TRBV10-1A0A0K0K1A3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV10-1A0A0K0K1A3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV10-1A0A0K0K1A3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC15.87■□□□□ 0.13
TRBV10-1A0A0K0K1A3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV10-1A0A0K0K1A3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV10-1A0A0K0K1A3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TRBV10-1A0A0K0K1A3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV10-1A0A0K0K1A3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC15.87■□□□□ 0.13
TRBV10-1A0A0K0K1A3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC15.87■□□□□ 0.13
TRBV10-1A0A0K0K1A3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV10-1A0A0K0K1A3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV10-1A0A0K0K1A3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV10-1A0A0K0K1A3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRBV10-1A0A0K0K1A3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC15.87■□□□□ 0.13
TRBV10-1A0A0K0K1A3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV10-1A0A0K0K1A3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TRBV10-1A0A0K0K1A3 AC233723.2-201ENST00000623798 2106 ntBASIC15.86■□□□□ 0.13
TRBV10-1A0A0K0K1A3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV10-1A0A0K0K1A3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TRBV10-1A0A0K0K1A3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC15.86■□□□□ 0.13
TRBV10-1A0A0K0K1A3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV10-1A0A0K0K1A3 YBX1P4-201ENST00000392794 808 ntBASIC15.86■□□□□ 0.13
TRBV10-1A0A0K0K1A3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms