Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.05■□□□□ 0.64
TRAV20A0A0B4J274 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.05■□□□□ 0.64
TRAV20A0A0B4J274 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV20A0A0B4J274 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TRAV20A0A0B4J274 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
TRAV20A0A0B4J274 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV20A0A0B4J274 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV20A0A0B4J274 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV20A0A0B4J274 SRD5A1P1-201ENST00000442297 786 ntBASIC19.05■□□□□ 0.64
TRAV20A0A0B4J274 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAV20A0A0B4J274 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV20A0A0B4J274 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV20A0A0B4J274 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV20A0A0B4J274 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TRAV20A0A0B4J274 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
TRAV20A0A0B4J274 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.05■□□□□ 0.64
TRAV20A0A0B4J274 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV20A0A0B4J274 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV20A0A0B4J274 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV20A0A0B4J274 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.04■□□□□ 0.64
TRAV20A0A0B4J274 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.04■□□□□ 0.64
TRAV20A0A0B4J274 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV20A0A0B4J274 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
TRAV20A0A0B4J274 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TRAV20A0A0B4J274 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TRAV20A0A0B4J274 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.03■□□□□ 0.64
TRAV20A0A0B4J274 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TRAV20A0A0B4J274 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.03■□□□□ 0.64
TRAV20A0A0B4J274 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.03■□□□□ 0.64
TRAV20A0A0B4J274 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.03■□□□□ 0.64
TRAV20A0A0B4J274 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV20A0A0B4J274 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV20A0A0B4J274 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.03■□□□□ 0.64
TRAV20A0A0B4J274 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV20A0A0B4J274 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.03■□□□□ 0.64
TRAV20A0A0B4J274 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TRAV20A0A0B4J274 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV20A0A0B4J274 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV20A0A0B4J274 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.02■□□□□ 0.64
TRAV20A0A0B4J274 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV20A0A0B4J274 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV20A0A0B4J274 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV20A0A0B4J274 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV20A0A0B4J274 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV20A0A0B4J274 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV20A0A0B4J274 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.01■□□□□ 0.63
TRAV20A0A0B4J274 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
TRAV20A0A0B4J274 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TRAV20A0A0B4J274 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV20A0A0B4J274 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV20A0A0B4J274 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TRAV20A0A0B4J274 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.01■□□□□ 0.63
TRAV20A0A0B4J274 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.01■□□□□ 0.63
TRAV20A0A0B4J274 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV20A0A0B4J274 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRAV20A0A0B4J274 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV20A0A0B4J274 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TRAV20A0A0B4J274 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19■□□□□ 0.63
TRAV20A0A0B4J274 PBX2P1-201ENST00000493219 1291 ntBASIC19■□□□□ 0.63
TRAV20A0A0B4J274 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
TRAV20A0A0B4J274 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAV20A0A0B4J274 AC106739.1-201ENST00000617035 715 ntBASIC19■□□□□ 0.63
TRAV20A0A0B4J274 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRAV20A0A0B4J274 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19■□□□□ 0.63
TRAV20A0A0B4J274 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV20A0A0B4J274 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19■□□□□ 0.63
TRAV20A0A0B4J274 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV20A0A0B4J274 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV20A0A0B4J274 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19■□□□□ 0.63
TRAV20A0A0B4J274 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV20A0A0B4J274 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV20A0A0B4J274 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.99■□□□□ 0.63
TRAV20A0A0B4J274 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAV20A0A0B4J274 AC091060.1-201ENST00000623524 1766 ntBASIC18.99■□□□□ 0.63
TRAV20A0A0B4J274 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV20A0A0B4J274 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TRAV20A0A0B4J274 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV20A0A0B4J274 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV20A0A0B4J274 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAV20A0A0B4J274 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.99■□□□□ 0.63
TRAV20A0A0B4J274 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
TRAV20A0A0B4J274 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV20A0A0B4J274 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV20A0A0B4J274 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV20A0A0B4J274 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV20A0A0B4J274 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV20A0A0B4J274 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV20A0A0B4J274 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAV20A0A0B4J274 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV20A0A0B4J274 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV20A0A0B4J274 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TRAV20A0A0B4J274 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV20A0A0B4J274 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV20A0A0B4J274 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAV20A0A0B4J274 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
TRAV20A0A0B4J274 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV20A0A0B4J274 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV20A0A0B4J274 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TRAV20A0A0B4J274 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV20A0A0B4J274 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms