Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 PCDHB18P-202ENST00000526308 3197 ntBASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 ABCD1P2-201ENST00000429313 1601 ntBASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 PDIA3P1-201ENST00000471856 1510 ntBASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 AL162726.2-201ENST00000438986 1017 ntBASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 AC009486.1-201ENST00000569860 813 ntBASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 RN7SL48P-201ENST00000579283 293 ntBASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 TNN-202ENST00000621086 4234 ntTSL 5 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 AC024075.2-201ENST00000598112 1473 ntBASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 AC090114.2-201ENST00000608477 7054 ntBASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 DDC-214ENST00000622873 1839 ntTSL 3 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC10.03□□□□□ -0.8
UBE2D4Q9Y2X8 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
UBE2D4Q9Y2X8 AL355102.3-201ENST00000554299 1678 ntBASIC10.02□□□□□ -0.8
UBE2D4Q9Y2X8 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC10.02□□□□□ -0.8
UBE2D4Q9Y2X8 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
UBE2D4Q9Y2X8 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC10.02□□□□□ -0.8
UBE2D4Q9Y2X8 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC10.02□□□□□ -0.8
UBE2D4Q9Y2X8 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC10.02□□□□□ -0.8
UBE2D4Q9Y2X8 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 NSL1-201ENST00000366976 722 ntTSL 2 BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 GAS5-209ENST00000430245 723 ntTSL 3 BASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 BASP1P1-201ENST00000430708 665 ntBASIC10.02□□□□□ -0.81
UBE2D4Q9Y2X8 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms