Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AC132812.1-201ENST00000583145 892 ntBASIC16.06■□□□□ 0.16
PTPN18Q99952 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC16.06■□□□□ 0.16
PTPN18Q99952 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN18Q99952 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN18Q99952 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.06■□□□□ 0.16
PTPN18Q99952 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PTPN18Q99952 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN18Q99952 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN18Q99952 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN18Q99952 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
PTPN18Q99952 PES1P2-201ENST00000449745 1735 ntBASIC16.05■□□□□ 0.16
PTPN18Q99952 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN18Q99952 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN18Q99952 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN18Q99952 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC16.05■□□□□ 0.16
PTPN18Q99952 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN18Q99952 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
PTPN18Q99952 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN18Q99952 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN18Q99952 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC16.05■□□□□ 0.16
PTPN18Q99952 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC16.05■□□□□ 0.16
PTPN18Q99952 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN18Q99952 CCND3P1-201ENST00000438347 580 ntBASIC16.05■□□□□ 0.16
PTPN18Q99952 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC16.05■□□□□ 0.16
PTPN18Q99952 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN18Q99952 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC16.05■□□□□ 0.16
PTPN18Q99952 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PTPN18Q99952 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC16.05■□□□□ 0.16
PTPN18Q99952 AP001462.1-201ENST00000594089 452 ntBASIC16.05■□□□□ 0.16
PTPN18Q99952 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN18Q99952 AC068760.1-201ENST00000493579 1953 ntBASIC16.05■□□□□ 0.16
PTPN18Q99952 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.05■□□□□ 0.16
PTPN18Q99952 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN18Q99952 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN18Q99952 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN18Q99952 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN18Q99952 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTPN18Q99952 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN18Q99952 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN18Q99952 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PTPN18Q99952 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN18Q99952 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN18Q99952 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.04■□□□□ 0.16
PTPN18Q99952 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.04■□□□□ 0.16
PTPN18Q99952 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.04■□□□□ 0.16
PTPN18Q99952 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN18Q99952 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PTPN18Q99952 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN18Q99952 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN18Q99952 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN18Q99952 HMGA1P1-201ENST00000415560 1062 ntBASIC16.04■□□□□ 0.16
PTPN18Q99952 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN18Q99952 AC108724.1-201ENST00000481669 352 ntBASIC16.04■□□□□ 0.16
PTPN18Q99952 AC092910.2-201ENST00000491262 348 ntBASIC16.04■□□□□ 0.16
PTPN18Q99952 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC16.04■□□□□ 0.16
PTPN18Q99952 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC16.04■□□□□ 0.16
PTPN18Q99952 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC16.04■□□□□ 0.16
PTPN18Q99952 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC16.04■□□□□ 0.16
PTPN18Q99952 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN18Q99952 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC16.04■□□□□ 0.16
PTPN18Q99952 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC16.04■□□□□ 0.16
PTPN18Q99952 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN18Q99952 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN18Q99952 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN18Q99952 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN18Q99952 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.04■□□□□ 0.16
PTPN18Q99952 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN18Q99952 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN18Q99952 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN18Q99952 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.04■□□□□ 0.16
PTPN18Q99952 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN18Q99952 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN18Q99952 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.04■□□□□ 0.16
PTPN18Q99952 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
PTPN18Q99952 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PTPN18Q99952 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN18Q99952 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.03■□□□□ 0.16
PTPN18Q99952 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN18Q99952 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN18Q99952 LILRP2-202ENST00000413572 1383 ntBASIC16.03■□□□□ 0.16
PTPN18Q99952 HLF-202ENST00000430986 1385 ntTSL 2 BASIC16.03■□□□□ 0.16
PTPN18Q99952 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN18Q99952 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN18Q99952 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
PTPN18Q99952 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN18Q99952 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN18Q99952 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PTPN18Q99952 RNA5SP491-201ENST00000362936 118 ntBASIC16.03■□□□□ 0.16
PTPN18Q99952 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN18Q99952 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN18Q99952 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PTPN18Q99952 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC16.03■□□□□ 0.16
PTPN18Q99952 MIR632-201ENST00000385193 94 ntBASIC16.03■□□□□ 0.16
PTPN18Q99952 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
PTPN18Q99952 PHBP10-201ENST00000416467 784 ntBASIC16.03■□□□□ 0.16
PTPN18Q99952 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC16.03■□□□□ 0.16
PTPN18Q99952 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC16.03■□□□□ 0.16
PTPN18Q99952 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC16.03■□□□□ 0.16
PTPN18Q99952 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC16.03■□□□□ 0.16
PTPN18Q99952 RPSAP70-201ENST00000504462 864 ntBASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms