Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM54Q969K7 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM54Q969K7 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM54Q969K7 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM54Q969K7 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM54Q969K7 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM54Q969K7 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM54Q969K7 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC12.59□□□□□ -0.39
TMEM54Q969K7 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
TMEM54Q969K7 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
TMEM54Q969K7 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
TMEM54Q969K7 AL365209.1-201ENST00000624418 6473 ntBASIC12.58□□□□□ -0.39
TMEM54Q969K7 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
TMEM54Q969K7 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
TMEM54Q969K7 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM54Q969K7 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM54Q969K7 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM54Q969K7 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM54Q969K7 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM54Q969K7 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.58□□□□□ -0.4
TMEM54Q969K7 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM54Q969K7 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM54Q969K7 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM54Q969K7 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM54Q969K7 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM54Q969K7 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM54Q969K7 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
TMEM54Q969K7 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM54Q969K7 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM54Q969K7 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM54Q969K7 RNA5SP359-201ENST00000364838 113 ntBASIC12.58□□□□□ -0.4
TMEM54Q969K7 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM54Q969K7 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TMEM54Q969K7 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM54Q969K7 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM54Q969K7 LBH-202ENST00000401506 485 ntTSL 3 BASIC12.58□□□□□ -0.4
TMEM54Q969K7 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM54Q969K7 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC12.58□□□□□ -0.4
TMEM54Q969K7 RPS9P1-201ENST00000419943 583 ntBASIC12.58□□□□□ -0.4
TMEM54Q969K7 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
TMEM54Q969K7 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC12.58□□□□□ -0.4
TMEM54Q969K7 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.58□□□□□ -0.4
TMEM54Q969K7 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM54Q969K7 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM54Q969K7 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC12.58□□□□□ -0.4
TMEM54Q969K7 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.58□□□□□ -0.4
TMEM54Q969K7 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
TMEM54Q969K7 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
TMEM54Q969K7 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM54Q969K7 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM54Q969K7 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM54Q969K7 CR392039.2-201ENST00000623182 509 ntBASIC12.58□□□□□ -0.4
TMEM54Q969K7 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TMEM54Q969K7 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
TMEM54Q969K7 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM54Q969K7 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM54Q969K7 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM54Q969K7 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM54Q969K7 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM54Q969K7 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM54Q969K7 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TMEM54Q969K7 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.58□□□□□ -0.4
TMEM54Q969K7 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.58□□□□□ -0.4
TMEM54Q969K7 TUBBP5-203ENST00000508529 1334 ntBASIC12.58□□□□□ -0.4
TMEM54Q969K7 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.58□□□□□ -0.4
TMEM54Q969K7 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
TMEM54Q969K7 AC010327.5-201ENST00000586923 3061 ntBASIC12.58□□□□□ -0.4
TMEM54Q969K7 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
TMEM54Q969K7 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TMEM54Q969K7 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM54Q969K7 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
TMEM54Q969K7 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.58□□□□□ -0.4
TMEM54Q969K7 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
TMEM54Q969K7 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.57□□□□□ -0.4
TMEM54Q969K7 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC12.57□□□□□ -0.4
TMEM54Q969K7 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.57□□□□□ -0.4
TMEM54Q969K7 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.57□□□□□ -0.4
TMEM54Q969K7 AC072061.1-201ENST00000569710 2234 ntBASIC12.57□□□□□ -0.4
TMEM54Q969K7 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
TMEM54Q969K7 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.57□□□□□ -0.4
TMEM54Q969K7 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.57□□□□□ -0.4
TMEM54Q969K7 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms