Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
BEST2Q8NFU1 AC139749.1-202ENST00000617529 3139 ntBASIC15.39■□□□□ 0.05
BEST2Q8NFU1 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.38■□□□□ 0.05
BEST2Q8NFU1 MARK2P16-201ENST00000605714 1723 ntBASIC15.38■□□□□ 0.05
BEST2Q8NFU1 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 MIR33B-201ENST00000385104 96 ntBASIC15.38■□□□□ 0.05
BEST2Q8NFU1 MIR557-201ENST00000385239 98 ntBASIC15.38■□□□□ 0.05
BEST2Q8NFU1 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 BAX-205ENST00000391871 687 ntTSL 5 BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 AL627231.1-201ENST00000394467 1125 ntBASIC15.38■□□□□ 0.05
BEST2Q8NFU1 AC103592.1-201ENST00000394513 664 ntBASIC15.38■□□□□ 0.05
BEST2Q8NFU1 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 AC073869.2-201ENST00000417338 1026 ntBASIC15.38■□□□□ 0.05
BEST2Q8NFU1 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 KRT18P15-201ENST00000458108 1291 ntBASIC15.38■□□□□ 0.05
BEST2Q8NFU1 PARP8-218ENST00000513738 596 ntTSL 4 BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 ELP5-212ENST00000574255 671 ntTSL 2 BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 MIR4722-201ENST00000578292 60 ntBASIC15.38■□□□□ 0.05
BEST2Q8NFU1 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.38■□□□□ 0.05
BEST2Q8NFU1 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 AC026316.1-201ENST00000398900 414 ntBASIC15.37■□□□□ 0.05
BEST2Q8NFU1 AL807761.2-201ENST00000422849 729 ntBASIC15.37■□□□□ 0.05
BEST2Q8NFU1 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 SIGLEC18P-201ENST00000602271 909 ntBASIC15.37■□□□□ 0.05
BEST2Q8NFU1 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 AL590824.1-201ENST00000403828 1349 ntBASIC15.37■□□□□ 0.05
BEST2Q8NFU1 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
BEST2Q8NFU1 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
BEST2Q8NFU1 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
BEST2Q8NFU1 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
BEST2Q8NFU1 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms