Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
SRFBP1Q8NEF9 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 KRT18P36-201ENST00000411618 1276 ntBASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 AC078875.1-201ENST00000431907 724 ntBASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 AC004898.1-201ENST00000451057 766 ntBASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 AL033527.4-201ENST00000641026 673 ntBASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 KRT8P24-201ENST00000560290 1559 ntBASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SRFBP1Q8NEF9 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 DPM3-202ENST00000368399 517 ntBASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 KRT18P15-201ENST00000458108 1291 ntBASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 AL512310.5-201ENST00000551999 515 ntBASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 AL132994.2-201ENST00000603120 687 ntBASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 AL008638.5-201ENST00000623814 1298 ntBASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 AC090643.2-201ENST00000623442 2029 ntBASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SRFBP1Q8NEF9 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms