Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC21.94■■□□□ 1.1
VPS8Q8N3P4 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
VPS8Q8N3P4 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
VPS8Q8N3P4 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VPS8Q8N3P4 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
VPS8Q8N3P4 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC21.94■■□□□ 1.1
VPS8Q8N3P4 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC21.94■■□□□ 1.1
VPS8Q8N3P4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
VPS8Q8N3P4 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC21.94■■□□□ 1.1
VPS8Q8N3P4 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 SNX18-202ENST00000343017 3140 ntBASIC21.93■■□□□ 1.1
VPS8Q8N3P4 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 ABR-228ENST00000574437 3196 ntTSL 5 BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 HINT1-205ENST00000508488 703 ntTSL 2 BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 RN7SKP155-201ENST00000516031 288 ntBASIC21.93■■□□□ 1.1
VPS8Q8N3P4 RNA5SP406-201ENST00000516106 112 ntBASIC21.93■■□□□ 1.1
VPS8Q8N3P4 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 RN7SL556P-201ENST00000582856 298 ntBASIC21.93■■□□□ 1.1
VPS8Q8N3P4 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
VPS8Q8N3P4 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 AC106827.1-201ENST00000366454 431 ntBASIC21.92■■□□□ 1.1
VPS8Q8N3P4 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 OR2W2P-201ENST00000406313 909 ntBASIC21.92■■□□□ 1.1
VPS8Q8N3P4 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 OR2A1-AS1-210ENST00000496968 531 ntBASIC21.92■■□□□ 1.1
VPS8Q8N3P4 AC093300.1-201ENST00000510368 1201 ntBASIC21.92■■□□□ 1.1
VPS8Q8N3P4 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 DBP-202ENST00000593500 712 ntTSL 2 BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 SNX1-214ENST00000625244 324 ntTSL 5 BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
VPS8Q8N3P4 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS8Q8N3P4 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS8Q8N3P4 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS8Q8N3P4 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
VPS8Q8N3P4 CROCCP1-201ENST00000426910 5675 ntBASIC21.91■■□□□ 1.1
VPS8Q8N3P4 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS8Q8N3P4 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
VPS8Q8N3P4 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS8Q8N3P4 Z69890.1-201ENST00000382990 339 ntBASIC21.91■■□□□ 1.1
VPS8Q8N3P4 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
VPS8Q8N3P4 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
VPS8Q8N3P4 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC21.91■■□□□ 1.1
VPS8Q8N3P4 AC092638.2-201ENST00000441105 947 ntBASIC21.91■■□□□ 1.1
VPS8Q8N3P4 LDHBP1-201ENST00000455730 1119 ntBASIC21.91■■□□□ 1.1
VPS8Q8N3P4 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
VPS8Q8N3P4 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC21.91■■□□□ 1.1
VPS8Q8N3P4 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC21.91■■□□□ 1.1
VPS8Q8N3P4 AL356740.1-201ENST00000602192 1297 ntBASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms