Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 HIST2H2BC-201ENST00000498492 580 ntBASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 SCARNA20.5-201ENST00000516991 142 ntBASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 AL021578.1-201ENST00000613646 709 ntBASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 KRT8P21-201ENST00000430398 1491 ntBASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SCUBE3Q8IX30 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 AL157791.1-201ENST00000553667 1699 ntBASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 USP17L6P-201ENST00000382470 1197 ntBASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 AC009712.1-201ENST00000564938 316 ntBASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 AC016629.1-201ENST00000596579 586 ntBASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SCUBE3Q8IX30 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 AC010422.1-201ENST00000414548 543 ntTSL 2 BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 TSPY25P-201ENST00000429463 745 ntBASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 MPRIPP1-201ENST00000452433 1089 ntBASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms