Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RNF44Q7L0R7 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
RNF44Q7L0R7 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
RNF44Q7L0R7 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.77□□□□□ -0.21
RNF44Q7L0R7 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF44Q7L0R7 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 AC020910.6-201ENST00000623084 1459 ntBASIC13.76□□□□□ -0.21
RNF44Q7L0R7 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 RNA5SP359-201ENST00000364838 113 ntBASIC13.76□□□□□ -0.21
RNF44Q7L0R7 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 AC006335.1-201ENST00000445200 547 ntBASIC13.76□□□□□ -0.21
RNF44Q7L0R7 IGHJ2P-201ENST00000454480 60 ntBASIC13.76□□□□□ -0.21
RNF44Q7L0R7 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 AC092053.3-201ENST00000641308 4975 ntBASIC13.76□□□□□ -0.21
RNF44Q7L0R7 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 AC012617.1-204ENST00000586340 2305 ntBASIC13.76□□□□□ -0.21
RNF44Q7L0R7 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 MIR193BHG-211ENST00000641433 5365 ntBASIC13.76□□□□□ -0.21
RNF44Q7L0R7 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 AC007191.1-201ENST00000623179 2995 ntBASIC13.76□□□□□ -0.21
RNF44Q7L0R7 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF44Q7L0R7 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms