Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VBP1P61758 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC12.89□□□□□ -0.35
VBP1P61758 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VBP1P61758 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VBP1P61758 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VBP1P61758 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC12.89□□□□□ -0.35
VBP1P61758 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VBP1P61758 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VBP1P61758 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VBP1P61758 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.89□□□□□ -0.35
VBP1P61758 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
VBP1P61758 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VBP1P61758 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VBP1P61758 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VBP1P61758 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VBP1P61758 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.89□□□□□ -0.35
VBP1P61758 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VBP1P61758 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VBP1P61758 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC12.88□□□□□ -0.35
VBP1P61758 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
VBP1P61758 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
VBP1P61758 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VBP1P61758 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VBP1P61758 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VBP1P61758 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.88□□□□□ -0.35
VBP1P61758 AC108024.1-201ENST00000626286 1721 ntBASIC12.88□□□□□ -0.35
VBP1P61758 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VBP1P61758 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VBP1P61758 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VBP1P61758 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
VBP1P61758 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC12.88□□□□□ -0.35
VBP1P61758 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VBP1P61758 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
VBP1P61758 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VBP1P61758 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.88□□□□□ -0.35
VBP1P61758 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.88□□□□□ -0.35
VBP1P61758 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.88□□□□□ -0.35
VBP1P61758 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.88□□□□□ -0.35
VBP1P61758 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.88□□□□□ -0.35
VBP1P61758 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.88□□□□□ -0.35
VBP1P61758 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.88□□□□□ -0.35
VBP1P61758 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC12.88□□□□□ -0.35
VBP1P61758 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.88□□□□□ -0.35
VBP1P61758 AL662844.1-201ENST00000546340 181 ntBASIC12.88□□□□□ -0.35
VBP1P61758 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.88□□□□□ -0.35
VBP1P61758 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
VBP1P61758 AL589739.1-201ENST00000607720 493 ntBASIC12.88□□□□□ -0.35
VBP1P61758 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VBP1P61758 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
VBP1P61758 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VBP1P61758 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
VBP1P61758 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
VBP1P61758 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
VBP1P61758 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VBP1P61758 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
VBP1P61758 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.88□□□□□ -0.35
VBP1P61758 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VBP1P61758 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VBP1P61758 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC12.88□□□□□ -0.35
VBP1P61758 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VBP1P61758 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
VBP1P61758 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
VBP1P61758 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VBP1P61758 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VBP1P61758 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.88□□□□□ -0.35
VBP1P61758 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VBP1P61758 AC002350.2-201ENST00000623894 1828 ntBASIC12.88□□□□□ -0.35
VBP1P61758 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
VBP1P61758 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
VBP1P61758 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VBP1P61758 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
VBP1P61758 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VBP1P61758 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC12.87□□□□□ -0.35
VBP1P61758 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VBP1P61758 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC12.87□□□□□ -0.35
VBP1P61758 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
VBP1P61758 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VBP1P61758 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VBP1P61758 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC12.87□□□□□ -0.35
VBP1P61758 AC124319.4-201ENST00000622931 2161 ntBASIC12.87□□□□□ -0.35
VBP1P61758 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
VBP1P61758 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VBP1P61758 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
VBP1P61758 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VBP1P61758 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VBP1P61758 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VBP1P61758 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VBP1P61758 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.87□□□□□ -0.35
VBP1P61758 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VBP1P61758 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
VBP1P61758 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC12.87□□□□□ -0.35
VBP1P61758 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
VBP1P61758 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VBP1P61758 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VBP1P61758 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VBP1P61758 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VBP1P61758 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.87□□□□□ -0.35
VBP1P61758 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.87□□□□□ -0.35
VBP1P61758 AC004832.2-201ENST00000426397 482 ntBASIC12.87□□□□□ -0.35
VBP1P61758 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms