Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CMC4P56277 AC011498.7-201ENST00000624986 2027 ntBASIC10.68□□□□□ -0.7
CMC4P56277 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
CMC4P56277 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC10.68□□□□□ -0.7
CMC4P56277 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CMC4P56277 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CMC4P56277 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CMC4P56277 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC10.68□□□□□ -0.7
CMC4P56277 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC10.68□□□□□ -0.7
CMC4P56277 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC10.68□□□□□ -0.7
CMC4P56277 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CMC4P56277 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
CMC4P56277 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC10.68□□□□□ -0.7
CMC4P56277 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC10.68□□□□□ -0.7
CMC4P56277 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CMC4P56277 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
CMC4P56277 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC10.68□□□□□ -0.7
CMC4P56277 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CMC4P56277 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CMC4P56277 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CMC4P56277 SHMT1P1-201ENST00000419974 1312 ntBASIC10.68□□□□□ -0.7
CMC4P56277 KRT18P9-201ENST00000604826 1300 ntBASIC10.68□□□□□ -0.7
CMC4P56277 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CMC4P56277 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
CMC4P56277 JTB-202ENST00000356648 1040 ntTSL 2 BASIC10.68□□□□□ -0.7
CMC4P56277 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CMC4P56277 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC10.68□□□□□ -0.7
CMC4P56277 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
CMC4P56277 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC10.68□□□□□ -0.7
CMC4P56277 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC10.68□□□□□ -0.7
CMC4P56277 KRTAP19-9P-201ENST00000421795 191 ntBASIC10.68□□□□□ -0.7
CMC4P56277 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC10.68□□□□□ -0.7
CMC4P56277 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC10.68□□□□□ -0.7
CMC4P56277 RN7SL258P-201ENST00000478664 300 ntBASIC10.68□□□□□ -0.7
CMC4P56277 AC099548.2-209ENST00000480264 625 ntBASIC10.68□□□□□ -0.7
CMC4P56277 CHCHD2P2-201ENST00000503744 321 ntBASIC10.68□□□□□ -0.7
CMC4P56277 AC008723.1-201ENST00000506922 207 ntBASIC10.68□□□□□ -0.7
CMC4P56277 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC10.68□□□□□ -0.7
CMC4P56277 KRT8P1-201ENST00000557533 1207 ntBASIC10.68□□□□□ -0.7
CMC4P56277 RN7SL774P-201ENST00000577467 290 ntBASIC10.68□□□□□ -0.7
CMC4P56277 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC10.68□□□□□ -0.7
CMC4P56277 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC10.68□□□□□ -0.7
CMC4P56277 KRT18P8-201ENST00000581937 1246 ntBASIC10.68□□□□□ -0.7
CMC4P56277 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC10.68□□□□□ -0.7
CMC4P56277 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC10.68□□□□□ -0.7
CMC4P56277 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
CMC4P56277 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
CMC4P56277 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC10.68□□□□□ -0.7
CMC4P56277 MIR6769A-201ENST00000617340 73 ntBASIC10.68□□□□□ -0.7
CMC4P56277 CU633904.3-201ENST00000624042 1029 ntBASIC10.68□□□□□ -0.7
CMC4P56277 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC10.68□□□□□ -0.7
CMC4P56277 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
CMC4P56277 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
CMC4P56277 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CMC4P56277 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
CMC4P56277 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC10.68□□□□□ -0.7
CMC4P56277 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CMC4P56277 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
CMC4P56277 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CMC4P56277 AP002353.1-201ENST00000528257 1599 ntBASIC10.68□□□□□ -0.7
CMC4P56277 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
CMC4P56277 CIC-204ENST00000572681 8218 ntTSL 5 BASIC10.68□□□□□ -0.7
CMC4P56277 GSN-209ENST00000449733 2702 ntTSL 2 BASIC10.68□□□□□ -0.7
CMC4P56277 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
CMC4P56277 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
CMC4P56277 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CMC4P56277 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
CMC4P56277 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC10.68□□□□□ -0.7
CMC4P56277 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
CMC4P56277 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CMC4P56277 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC10.68□□□□□ -0.7
CMC4P56277 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC10.68□□□□□ -0.7
CMC4P56277 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
CMC4P56277 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CMC4P56277 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
CMC4P56277 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CMC4P56277 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CMC4P56277 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
CMC4P56277 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC10.67□□□□□ -0.7
CMC4P56277 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
CMC4P56277 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC10.67□□□□□ -0.7
CMC4P56277 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC10.67□□□□□ -0.7
CMC4P56277 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC10.67□□□□□ -0.7
CMC4P56277 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC10.67□□□□□ -0.7
CMC4P56277 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC10.67□□□□□ -0.7
CMC4P56277 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC10.67□□□□□ -0.7
CMC4P56277 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC10.67□□□□□ -0.7
CMC4P56277 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC10.67□□□□□ -0.7
CMC4P56277 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms