Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLCSP50747 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLCSP50747 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLCSP50747 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HLCSP50747 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HLCSP50747 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
HLCSP50747 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLCSP50747 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLCSP50747 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.8□□□□□ -0.2
HLCSP50747 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.8□□□□□ -0.2
HLCSP50747 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLCSP50747 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.8□□□□□ -0.2
HLCSP50747 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.8□□□□□ -0.2
HLCSP50747 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
HLCSP50747 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLCSP50747 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HLCSP50747 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.8□□□□□ -0.2
HLCSP50747 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.8□□□□□ -0.2
HLCSP50747 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.8□□□□□ -0.2
HLCSP50747 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.8□□□□□ -0.2
HLCSP50747 AC006033.1-201ENST00000440505 426 ntBASIC13.8□□□□□ -0.2
HLCSP50747 CHMP1AP1-201ENST00000445563 662 ntBASIC13.8□□□□□ -0.2
HLCSP50747 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.8□□□□□ -0.2
HLCSP50747 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HLCSP50747 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLCSP50747 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.8□□□□□ -0.2
HLCSP50747 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.8□□□□□ -0.2
HLCSP50747 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
HLCSP50747 AC005695.3-201ENST00000614522 232 ntBASIC13.8□□□□□ -0.2
HLCSP50747 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
HLCSP50747 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.8□□□□□ -0.2
HLCSP50747 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
HLCSP50747 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.8□□□□□ -0.2
HLCSP50747 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.8□□□□□ -0.2
HLCSP50747 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HLCSP50747 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLCSP50747 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.8□□□□□ -0.2
HLCSP50747 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.8□□□□□ -0.2
HLCSP50747 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
HLCSP50747 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.8□□□□□ -0.2
HLCSP50747 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLCSP50747 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLCSP50747 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
HLCSP50747 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HLCSP50747 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLCSP50747 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLCSP50747 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLCSP50747 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLCSP50747 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.79□□□□□ -0.2
HLCSP50747 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.79□□□□□ -0.2
HLCSP50747 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HLCSP50747 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
HLCSP50747 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HLCSP50747 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.79□□□□□ -0.2
HLCSP50747 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLCSP50747 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
HLCSP50747 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLCSP50747 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.79□□□□□ -0.2
HLCSP50747 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLCSP50747 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLCSP50747 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLCSP50747 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
HLCSP50747 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLCSP50747 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLCSP50747 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLCSP50747 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLCSP50747 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.79□□□□□ -0.2
HLCSP50747 HSPB1P2-201ENST00000448722 546 ntBASIC13.79□□□□□ -0.2
HLCSP50747 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLCSP50747 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.79□□□□□ -0.2
HLCSP50747 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.79□□□□□ -0.2
HLCSP50747 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.79□□□□□ -0.2
HLCSP50747 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.79□□□□□ -0.2
HLCSP50747 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.79□□□□□ -0.2
HLCSP50747 AL096828.3-201ENST00000615354 462 ntBASIC13.79□□□□□ -0.2
HLCSP50747 AL008638.5-201ENST00000623814 1298 ntBASIC13.79□□□□□ -0.2
HLCSP50747 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLCSP50747 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.79□□□□□ -0.2
HLCSP50747 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLCSP50747 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLCSP50747 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.79□□□□□ -0.2
HLCSP50747 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HLCSP50747 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.79□□□□□ -0.2
HLCSP50747 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.79□□□□□ -0.2
HLCSP50747 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
HLCSP50747 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HLCSP50747 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
HLCSP50747 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HLCSP50747 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLCSP50747 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HLCSP50747 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
HLCSP50747 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HLCSP50747 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
HLCSP50747 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HLCSP50747 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.78□□□□□ -0.2
HLCSP50747 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HLCSP50747 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.78□□□□□ -0.2
HLCSP50747 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HLCSP50747 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HLCSP50747 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms