Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.81□□□□□ -0.36
CSNK1A1P48729 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSNK1A1P48729 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSNK1A1P48729 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSNK1A1P48729 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CSNK1A1P48729 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSNK1A1P48729 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CSNK1A1P48729 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.81□□□□□ -0.36
CSNK1A1P48729 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.8□□□□□ -0.36
CSNK1A1P48729 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSNK1A1P48729 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSNK1A1P48729 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CSNK1A1P48729 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSNK1A1P48729 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CSNK1A1P48729 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
CSNK1A1P48729 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.8□□□□□ -0.36
CSNK1A1P48729 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
CSNK1A1P48729 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CSNK1A1P48729 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.8□□□□□ -0.36
CSNK1A1P48729 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CSNK1A1P48729 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.8□□□□□ -0.36
CSNK1A1P48729 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.8□□□□□ -0.36
CSNK1A1P48729 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSNK1A1P48729 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSNK1A1P48729 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CSNK1A1P48729 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSNK1A1P48729 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSNK1A1P48729 AC090643.2-201ENST00000623442 2029 ntBASIC12.8□□□□□ -0.36
CSNK1A1P48729 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSNK1A1P48729 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSNK1A1P48729 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC12.8□□□□□ -0.36
CSNK1A1P48729 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.8□□□□□ -0.36
CSNK1A1P48729 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC12.8□□□□□ -0.36
CSNK1A1P48729 AL591846.1-201ENST00000451736 433 ntBASIC12.8□□□□□ -0.36
CSNK1A1P48729 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CSNK1A1P48729 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CSNK1A1P48729 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CSNK1A1P48729 SCARNA21-201ENST00000517026 139 ntBASIC12.8□□□□□ -0.36
CSNK1A1P48729 FAM8A2P-201ENST00000528813 1142 ntBASIC12.8□□□□□ -0.36
CSNK1A1P48729 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.8□□□□□ -0.36
CSNK1A1P48729 AC005324.6-201ENST00000587972 613 ntBASIC12.8□□□□□ -0.36
CSNK1A1P48729 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.8□□□□□ -0.36
CSNK1A1P48729 AP000346.4-201ENST00000614827 381 ntBASIC12.8□□□□□ -0.36
CSNK1A1P48729 PRKN-211ENST00000615065 261 ntTSL 5 BASIC12.8□□□□□ -0.36
CSNK1A1P48729 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CSNK1A1P48729 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSNK1A1P48729 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSNK1A1P48729 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSNK1A1P48729 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CSNK1A1P48729 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CSNK1A1P48729 CYP4F23P-201ENST00000593402 1579 ntBASIC12.8□□□□□ -0.36
CSNK1A1P48729 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CSNK1A1P48729 AHCYP4-201ENST00000419201 1315 ntBASIC12.8□□□□□ -0.36
CSNK1A1P48729 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSNK1A1P48729 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSNK1A1P48729 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.8□□□□□ -0.36
CSNK1A1P48729 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CSNK1A1P48729 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSNK1A1P48729 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.8□□□□□ -0.36
CSNK1A1P48729 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSNK1A1P48729 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CSNK1A1P48729 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSNK1A1P48729 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSNK1A1P48729 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CSNK1A1P48729 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CSNK1A1P48729 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.79□□□□□ -0.36
CSNK1A1P48729 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSNK1A1P48729 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CSNK1A1P48729 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSNK1A1P48729 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSNK1A1P48729 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSNK1A1P48729 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CSNK1A1P48729 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSNK1A1P48729 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSNK1A1P48729 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSNK1A1P48729 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.79□□□□□ -0.36
CSNK1A1P48729 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSNK1A1P48729 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSNK1A1P48729 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.79□□□□□ -0.36
CSNK1A1P48729 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSNK1A1P48729 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.79□□□□□ -0.36
CSNK1A1P48729 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CSNK1A1P48729 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.79□□□□□ -0.36
CSNK1A1P48729 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSNK1A1P48729 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSNK1A1P48729 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.79□□□□□ -0.36
CSNK1A1P48729 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.79□□□□□ -0.36
CSNK1A1P48729 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSNK1A1P48729 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSNK1A1P48729 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.79□□□□□ -0.36
CSNK1A1P48729 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSNK1A1P48729 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CSNK1A1P48729 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CSNK1A1P48729 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC12.79□□□□□ -0.36
CSNK1A1P48729 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSNK1A1P48729 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.79□□□□□ -0.36
CSNK1A1P48729 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC12.79□□□□□ -0.36
CSNK1A1P48729 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CSNK1A1P48729 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.79□□□□□ -0.36
CSNK1A1P48729 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms