Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.15■□□□□ 0.02
RFC1P35251 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.15■□□□□ 0.02
RFC1P35251 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.15■□□□□ 0.02
RFC1P35251 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
RFC1P35251 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.15■□□□□ 0.02
RFC1P35251 AC021016.3-201ENST00000608367 477 ntBASIC15.15■□□□□ 0.02
RFC1P35251 AC133540.1-201ENST00000620845 1019 ntBASIC15.15■□□□□ 0.02
RFC1P35251 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.15■□□□□ 0.02
RFC1P35251 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RFC1P35251 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.15■□□□□ 0.02
RFC1P35251 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFC1P35251 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFC1P35251 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.15■□□□□ 0.02
RFC1P35251 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFC1P35251 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RFC1P35251 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFC1P35251 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFC1P35251 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFC1P35251 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RFC1P35251 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RFC1P35251 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFC1P35251 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFC1P35251 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.15■□□□□ 0.02
RFC1P35251 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFC1P35251 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.14■□□□□ 0.01
RFC1P35251 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.14■□□□□ 0.01
RFC1P35251 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.14■□□□□ 0.01
RFC1P35251 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFC1P35251 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFC1P35251 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC15.14■□□□□ 0.01
RFC1P35251 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFC1P35251 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFC1P35251 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFC1P35251 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFC1P35251 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFC1P35251 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFC1P35251 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFC1P35251 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFC1P35251 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFC1P35251 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
RFC1P35251 USP17L6P-201ENST00000382470 1197 ntBASIC15.14■□□□□ 0.01
RFC1P35251 KRT18P36-201ENST00000411618 1276 ntBASIC15.14■□□□□ 0.01
RFC1P35251 AL591846.1-201ENST00000451736 433 ntBASIC15.14■□□□□ 0.01
RFC1P35251 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RFC1P35251 TMEM198B-204ENST00000484016 896 ntBASIC15.14■□□□□ 0.01
RFC1P35251 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.14■□□□□ 0.01
RFC1P35251 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.14■□□□□ 0.01
RFC1P35251 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.14■□□□□ 0.01
RFC1P35251 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.14■□□□□ 0.01
RFC1P35251 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.14■□□□□ 0.01
RFC1P35251 AC008805.1-201ENST00000590892 364 ntBASIC15.14■□□□□ 0.01
RFC1P35251 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.14■□□□□ 0.01
RFC1P35251 AC022748.3-201ENST00000621828 275 ntBASIC15.14■□□□□ 0.01
RFC1P35251 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFC1P35251 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.14■□□□□ 0.01
RFC1P35251 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RFC1P35251 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFC1P35251 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RFC1P35251 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFC1P35251 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RFC1P35251 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFC1P35251 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
RFC1P35251 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RFC1P35251 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFC1P35251 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFC1P35251 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.14■□□□□ 0.01
RFC1P35251 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFC1P35251 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.14■□□□□ 0.01
RFC1P35251 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFC1P35251 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFC1P35251 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFC1P35251 AC111170.3-201ENST00000624282 2464 ntBASIC15.14■□□□□ 0.01
RFC1P35251 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RFC1P35251 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.13■□□□□ 0.01
RFC1P35251 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.13■□□□□ 0.01
RFC1P35251 FAM90A7P-201ENST00000382628 1395 ntBASIC15.13■□□□□ 0.01
RFC1P35251 FAM90A23P-201ENST00000400136 1395 ntBASIC15.13■□□□□ 0.01
RFC1P35251 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.13■□□□□ 0.01
RFC1P35251 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RFC1P35251 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.13■□□□□ 0.01
RFC1P35251 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RFC1P35251 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.13■□□□□ 0.01
RFC1P35251 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.13■□□□□ 0.01
RFC1P35251 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RFC1P35251 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RFC1P35251 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RFC1P35251 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RFC1P35251 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms