Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.13□□□□□ -0.47
COL8A2P25067 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
COL8A2P25067 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC12.13□□□□□ -0.47
COL8A2P25067 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC12.13□□□□□ -0.47
COL8A2P25067 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.13□□□□□ -0.47
COL8A2P25067 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.13□□□□□ -0.47
COL8A2P25067 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC12.13□□□□□ -0.47
COL8A2P25067 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC12.13□□□□□ -0.47
COL8A2P25067 RPSAP15-201ENST00000448168 861 ntBASIC12.13□□□□□ -0.47
COL8A2P25067 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC12.13□□□□□ -0.47
COL8A2P25067 COG4-212ENST00000564653 590 ntTSL 5 BASIC12.13□□□□□ -0.47
COL8A2P25067 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.13□□□□□ -0.47
COL8A2P25067 RN7SL190P-201ENST00000582519 257 ntBASIC12.13□□□□□ -0.47
COL8A2P25067 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC12.13□□□□□ -0.47
COL8A2P25067 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC12.13□□□□□ -0.47
COL8A2P25067 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC12.13□□□□□ -0.47
COL8A2P25067 AC090386.2-201ENST00000623010 1039 ntBASIC12.13□□□□□ -0.47
COL8A2P25067 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.13□□□□□ -0.47
COL8A2P25067 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.13□□□□□ -0.47
COL8A2P25067 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.13□□□□□ -0.47
COL8A2P25067 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 AC011498.7-201ENST00000624986 2027 ntBASIC12.13□□□□□ -0.47
COL8A2P25067 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.13□□□□□ -0.47
COL8A2P25067 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
COL8A2P25067 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
COL8A2P25067 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
COL8A2P25067 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
COL8A2P25067 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
COL8A2P25067 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
COL8A2P25067 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
COL8A2P25067 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
COL8A2P25067 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
COL8A2P25067 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.12□□□□□ -0.47
COL8A2P25067 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.12□□□□□ -0.47
COL8A2P25067 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
COL8A2P25067 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
COL8A2P25067 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
COL8A2P25067 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.12□□□□□ -0.47
COL8A2P25067 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
COL8A2P25067 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
COL8A2P25067 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
COL8A2P25067 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.12□□□□□ -0.47
COL8A2P25067 AL583805.1-201ENST00000391389 531 ntBASIC12.12□□□□□ -0.47
COL8A2P25067 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
COL8A2P25067 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC12.12□□□□□ -0.47
COL8A2P25067 RPS9P1-201ENST00000419943 583 ntBASIC12.12□□□□□ -0.47
COL8A2P25067 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.12□□□□□ -0.47
COL8A2P25067 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.12□□□□□ -0.47
COL8A2P25067 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
COL8A2P25067 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.12□□□□□ -0.47
COL8A2P25067 AP000358.1-201ENST00000456260 156 ntBASIC12.12□□□□□ -0.47
COL8A2P25067 RN7SL277P-201ENST00000481521 288 ntBASIC12.12□□□□□ -0.47
COL8A2P25067 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
COL8A2P25067 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
COL8A2P25067 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
COL8A2P25067 NEU3-205ENST00000531619 582 ntTSL 5 BASIC12.12□□□□□ -0.47
COL8A2P25067 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
COL8A2P25067 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC12.12□□□□□ -0.47
COL8A2P25067 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
COL8A2P25067 MIR3677-201ENST00000578964 60 ntBASIC12.12□□□□□ -0.47
COL8A2P25067 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.12□□□□□ -0.47
COL8A2P25067 SIGLEC18P-201ENST00000602271 909 ntBASIC12.12□□□□□ -0.47
COL8A2P25067 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
COL8A2P25067 MIR6074-201ENST00000612054 107 ntBASIC12.12□□□□□ -0.47
COL8A2P25067 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.12□□□□□ -0.47
COL8A2P25067 AC128714.1-201ENST00000637035 887 ntBASIC12.12□□□□□ -0.47
COL8A2P25067 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
COL8A2P25067 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
COL8A2P25067 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC12.12□□□□□ -0.47
COL8A2P25067 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
COL8A2P25067 LAP3P2-201ENST00000454686 1454 ntBASIC12.12□□□□□ -0.47
COL8A2P25067 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
COL8A2P25067 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.12□□□□□ -0.47
COL8A2P25067 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
COL8A2P25067 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
COL8A2P25067 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.12□□□□□ -0.47
COL8A2P25067 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
COL8A2P25067 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms