Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH3P22223 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDH3P22223 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH3P22223 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.18□□□□□ -0.14
CDH3P22223 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.18□□□□□ -0.14
CDH3P22223 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH3P22223 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.18□□□□□ -0.14
CDH3P22223 MIR6720-201ENST00000611664 98 ntBASIC14.18□□□□□ -0.14
CDH3P22223 AC022748.3-201ENST00000621828 275 ntBASIC14.18□□□□□ -0.14
CDH3P22223 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH3P22223 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH3P22223 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDH3P22223 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH3P22223 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDH3P22223 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH3P22223 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH3P22223 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH3P22223 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH3P22223 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH3P22223 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDH3P22223 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH3P22223 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CDH3P22223 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH3P22223 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
CDH3P22223 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH3P22223 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CDH3P22223 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH3P22223 AC018529.2-202ENST00000611482 3087 ntBASIC14.18□□□□□ -0.14
CDH3P22223 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH3P22223 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH3P22223 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH3P22223 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH3P22223 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CDH3P22223 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH3P22223 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH3P22223 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH3P22223 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH3P22223 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.17□□□□□ -0.14
CDH3P22223 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH3P22223 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CDH3P22223 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH3P22223 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH3P22223 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH3P22223 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH3P22223 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.17□□□□□ -0.14
CDH3P22223 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CDH3P22223 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CDH3P22223 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.17□□□□□ -0.14
CDH3P22223 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH3P22223 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH3P22223 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH3P22223 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
CDH3P22223 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.17□□□□□ -0.14
CDH3P22223 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
CDH3P22223 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CDH3P22223 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH3P22223 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH3P22223 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH3P22223 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH3P22223 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CDH3P22223 CALR4P-201ENST00000431943 946 ntBASIC14.17□□□□□ -0.14
CDH3P22223 AC013355.1-201ENST00000562625 723 ntBASIC14.17□□□□□ -0.14
CDH3P22223 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.17□□□□□ -0.14
CDH3P22223 AC008805.1-201ENST00000590892 364 ntBASIC14.17□□□□□ -0.14
CDH3P22223 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CDH3P22223 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.17□□□□□ -0.14
CDH3P22223 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.17□□□□□ -0.14
CDH3P22223 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.17□□□□□ -0.14
CDH3P22223 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC14.17□□□□□ -0.14
CDH3P22223 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH3P22223 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH3P22223 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH3P22223 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.17□□□□□ -0.14
CDH3P22223 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDH3P22223 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.17□□□□□ -0.14
CDH3P22223 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH3P22223 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.17□□□□□ -0.14
CDH3P22223 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CDH3P22223 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH3P22223 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH3P22223 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH3P22223 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CDH3P22223 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH3P22223 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.17□□□□□ -0.14
CDH3P22223 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
CDH3P22223 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH3P22223 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH3P22223 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDH3P22223 AC092053.3-201ENST00000641308 4975 ntBASIC14.16□□□□□ -0.14
CDH3P22223 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CDH3P22223 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH3P22223 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH3P22223 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH3P22223 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH3P22223 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH3P22223 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH3P22223 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.16□□□□□ -0.14
CDH3P22223 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH3P22223 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
CDH3P22223 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms